RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 PBX3P40426 434 aa13.38□□□□□ -0.27
CTTN-201ENST00000301843 ZNF135P52742 658 aaPredicted RBP13.38□□□□□ -0.27
CTTN-201ENST00000301843 PLA2G16P53816 162 aa13.38□□□□□ -0.27
CTTN-201ENST00000301843 NFKB2Q00653 900 aa13.38□□□□□ -0.27
CTTN-201ENST00000301843 CTU2Q2VPK5 515 aaKnown RBP13.38□□□□□ -0.27
CTTN-201ENST00000301843 XAF1Q6GPH4 301 aa13.38□□□□□ -0.27
CTTN-201ENST00000301843 SAPCD2Q86UD0 394 aa13.38□□□□□ -0.27
CTTN-201ENST00000301843 TBC1D21Q8IYX1 336 aa13.38□□□□□ -0.27
CTTN-201ENST00000301843 THEM5Q8N1Q8 247 aa13.38□□□□□ -0.27
CTTN-201ENST00000301843 PACRGLQ8N7B6 248 aa13.38□□□□□ -0.27
CTTN-201ENST00000301843 GABPB2Q8TAK5 448 aaPredicted RBP13.38□□□□□ -0.27
CTTN-201ENST00000301843 GIPC2Q8TF65 315 aa13.38□□□□□ -0.27
CTTN-201ENST00000301843 STON2Q8WXE9 905 aa13.38□□□□□ -0.27
CTTN-201ENST00000301843 KIAA1191Q96A73 305 aa13.38□□□□□ -0.27
CTTN-201ENST00000301843 COX4I2Q96KJ9 171 aa13.38□□□□□ -0.27
CTTN-201ENST00000301843 BEGAINQ9BUH8 593 aa13.38□□□□□ -0.27
CTTN-201ENST00000301843 TRIM54Q9BYV2 358 aa13.38□□□□□ -0.27
CTTN-201ENST00000301843 POLR1EQ9GZS1 481 aaKnown RBP13.38□□□□□ -0.27
CTTN-201ENST00000301843 LEF1Q9UJU2 399 aaPredicted RBP13.38□□□□□ -0.27
CTTN-201ENST00000301843 PCDHB3Q9Y5E6 796 aa13.38□□□□□ -0.27
CTTN-201ENST00000301843 LOC285095A0A1B0GVY8 99 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 SNAP91O60641 907 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 MATN4O95460 622 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 TGFBR1P36897 503 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 RPS24P62847 133 aaKnown RBP13.37□□□□□ -0.27
CTTN-201ENST00000301843 DGCR6Q14129 220 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 GPRIN3Q6ZVF9 776 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 ANKRD46Q86W74 232 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 C10orf111Q8N326 155 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 KRTCAP2Q8N6L1 136 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 CNIH3Q8TBE1 160 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 BORCS5Q969J3 196 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 NCLNQ969V3 563 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 CCDC138Q96M89 665 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 ZNF599Q96NL3 588 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 ACTL8Q9H568 366 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 PRDM5Q9NQX1 630 aaPredicted RBP13.37□□□□□ -0.27
CTTN-201ENST00000301843 POLE4Q9NR33 117 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 INTS10Q9NVR2 710 aaKnown RBP13.37□□□□□ -0.27
CTTN-201ENST00000301843 HCSTQ9UBK5 93 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.37□□□□□ -0.27
CTTN-201ENST00000301843 SCN4AP35499 1836 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 IQCA1LA6NCM1 817 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 HS6ST1O60243 411 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 MITFO75030 526 aaPredicted RBP13.37□□□□□ -0.27
CTTN-201ENST00000301843 DIRAS1O95057 198 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 THRBP10828 461 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 RHOQP17081 205 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 OPRL1P41146 370 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 OR1G1P47890 313 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 GSSP48637 474 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 HLCSP50747 726 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 RAD23AP54725 363 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 RPL38P63173 70 aaKnown RBP13.37□□□□□ -0.27
CTTN-201ENST00000301843 ZNF829Q3KNS6 432 aaPredicted RBP13.37□□□□□ -0.27
CTTN-201ENST00000301843 TMEM179BQ7Z7N9 219 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 CCDC117Q8IWD4 279 aaPredicted RBP13.37□□□□□ -0.27
CTTN-201ENST00000301843 ALDH16A1Q8IZ83 802 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 LGI2Q8N0V4 545 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 TMCO5AQ8N6Q1 288 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 OR6K2Q8NGY2 324 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 SEPT5Q99719 369 aaPredicted RBP13.37□□□□□ -0.27
CTTN-201ENST00000301843 SYT17Q9BSW7 474 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 BDH2Q9BUT1 245 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 APOL5Q9BWW9 433 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 AMBRA1Q9C0C7 1298 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 TRPV2Q9Y5S1 764 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 TRIM64CA6NLI5 447 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 UPK3BL1B0FP48 263 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 UPK3BL2E5RIL1 263 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 GSTA4O15217 222 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 CHEK2O96017 543 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 HTR1AP08908 422 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 SLC2A4P14672 509 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 IDUAP35475 653 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 RELAQ04206 551 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 ABRAXAS2Q15018 415 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 MAPK11Q15759 364 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 CCDC81Q6ZN84 652 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 IGFN1Q86VF2 1251 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 GPSM1Q86YR5 675 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 CROCCP3Q8IVE0 287 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 ZNF683Q8IZ20 524 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 OR13F1Q8NGS4 319 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 FAM210AQ96ND0 272 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 TFB2MQ9H5Q4 396 aaKnown RBP13.37□□□□□ -0.27
CTTN-201ENST00000301843 SLC6A13Q9NSD5 602 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 TUBA8Q9NY65 449 aaPredicted RBP13.37□□□□□ -0.27
CTTN-201ENST00000301843 MARCH2Q9P0N8 246 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 ZNHIT2Q9UHR6 403 aa13.37□□□□□ -0.27
CTTN-201ENST00000301843 MYO16Q9Y6X6 1858 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 KRT87PA6NCN2 255 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 E5RI56 91 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 ADAM23O75077 832 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 EEDO75530 441 aaKnown RBP13.36□□□□□ -0.27
CTTN-201ENST00000301843 PAPSS2O95340 614 aaPredicted RBP13.36□□□□□ -0.27
CTTN-201ENST00000301843 ESRRBO95718 433 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 CST1P01037 141 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 TAF10Q12962 218 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 TAF2Q6P1X5 1199 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms