RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 YME1L1Q96TA2 773 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 FAM49AQ9H0Q0 323 aaPredicted RBP10.76□□□□□ -0.69
ZNF558-201ENST00000301475 MARCH7Q9H992 704 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 AS3MTQ9HBK9 375 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 GOLGA2P5Q9HBQ8 144 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 ITM2CQ9NQX7 267 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 ENTPD7Q9NQZ7 604 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 SMPD4Q9NXE4 827 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 IL37Q9NZH6 218 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 TMEFF2Q9UIK5 374 aaPredicted RBP10.76□□□□□ -0.69
ZNF558-201ENST00000301475 OSGIN1Q9UJX0 560 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 TYW5A2RUC4 315 aaKnown RBP10.76□□□□□ -0.69
ZNF558-201ENST00000301475 ADM5C9JUS6 153 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 TNFRSF10AO00220 468 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 FADS2O95864 444 aaKnown RBP10.76□□□□□ -0.69
ZNF558-201ENST00000301475 GSNP06396 782 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 MAP3K7CLP57077 242 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 PLIN5Q00G26 463 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 EPS8Q12929 822 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 AAK1Q2M2I8 961 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 ARMCX6Q7L4S7 300 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 PRSS48Q7RTY5 328 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 FBXO16Q8IX29 292 aaPredicted RBP10.76□□□□□ -0.69
ZNF558-201ENST00000301475 ATPAF2Q8N5M1 289 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 BEST2Q8NFU1 509 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 PROKR1Q8TCW9 393 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 FBLIM1Q8WUP2 373 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 FIG4Q92562 907 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 EDEM1Q92611 657 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 ZNF566Q969W8 418 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 CLIP3Q96DZ5 547 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 ASB2Q96Q27 587 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 RBM4BQ9BQ04 359 aaKnown RBP10.76□□□□□ -0.69
ZNF558-201ENST00000301475 RBM4Q9BWF3 364 aaKnown RBP10.76□□□□□ -0.69
ZNF558-201ENST00000301475 ASPSCR1Q9BZE9 553 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 PRKD2Q9BZL6 878 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 RGS18Q9NS28 235 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 COMMD8Q9NX08 183 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 DNAJB9Q9UBS3 223 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 ZNF225Q9UK10 706 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 NUDT5Q9UKK9 219 aa10.76□□□□□ -0.69
ZNF558-201ENST00000301475 A0A1W2PQ67 120 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 ISPDA4D126 451 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 NOTOA8MTQ0 251 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 S1PR4O95977 384 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 MT-ND2P03891 347 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 GEMP55040 296 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 DAOAP59103 153 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 SLC35A2P78381 396 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 IL5RAQ01344 420 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 VAC14Q08AM6 782 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 LCP2Q13094 533 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 NPTX1Q15818 432 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 XKR7Q5GH72 579 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 HABP4Q5JVS0 413 aaKnown RBP10.75□□□□□ -0.69
ZNF558-201ENST00000301475 SYT6Q5T7P8 510 aaPredicted RBP10.75□□□□□ -0.69
ZNF558-201ENST00000301475 KIAA0319Q5VV43 1072 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 ZNF549Q6P9A3 640 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 MOB2Q70IA6 237 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 SPATC1Q76KD6 591 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 LRRC49Q8IUZ0 686 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 GPC2Q8N158 579 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 SVOPQ8N4V2 548 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 MCFD2Q8NI22 146 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 ATL1Q8WXF7 558 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 LGALS12Q96DT0 336 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 REXO5Q96IC2 774 aaKnown RBP10.75□□□□□ -0.69
ZNF558-201ENST00000301475 ATOH8Q96SQ7 321 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 ACOX2Q99424 681 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 C17orf80Q9BSJ5 609 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 RNF38Q9H0F5 515 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 PRDM8Q9NQV8 689 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 TMEM30AQ9NV96 361 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 TBC1D14Q9P2M4 693 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 EIF3FO00303 357 aaPredicted RBP10.75□□□□□ -0.69
ZNF558-201ENST00000301475 BCKDKO14874 412 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 MAFKO60675 156 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 SNX2O60749 519 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 MITFO75030 526 aaPredicted RBP10.75□□□□□ -0.69
ZNF558-201ENST00000301475 FTH1P02794 183 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 ITGB6P18564 788 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 GTF2E2P29084 291 aaKnown RBP10.75□□□□□ -0.69
ZNF558-201ENST00000301475 TGFBR2P37173 567 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 MRPL19P49406 292 aaKnown RBP10.75□□□□□ -0.69
ZNF558-201ENST00000301475 PPP2R2DQ66LE6 453 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 NEK10Q6ZWH5 1172 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 SPATA19Q7Z5L4 167 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 CELF2-AS1Q8N7Q2 184 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 PYCR2Q96C36 320 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 NDFIP2Q9NV92 336 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 HOXC10Q9NYD6 342 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 OPTCQ9UBM4 332 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 U3KQV3 271 aa10.75□□□□□ -0.69
ZNF558-201ENST00000301475 LTBP3Q9NS15 1303 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 SSX4O60224 188 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 PGK2P07205 417 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 USP17L7P0C7H9 530 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 CA8P35219 290 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 DCTP40126 519 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 CXCR3P49682 368 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms