RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 KCNK12Q9HB15 430 aa15.49■□□□□ 0.07
HERPUD1-201ENST00000300302 TXLNGQ9NUQ3 528 aa15.49■□□□□ 0.07
HERPUD1-201ENST00000300302 CD274Q9NZQ7 290 aa15.49■□□□□ 0.07
HERPUD1-201ENST00000300302 PIAS3Q9Y6X2 628 aa15.49■□□□□ 0.07
HERPUD1-201ENST00000300302 FCHO1O14526 889 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 MMP20O60882 483 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 FTH1P02794 183 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 S100BP04271 92 aaPredicted RBP15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 FOSL2P15408 326 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 DRD1P21728 446 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 DPTQ07507 201 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 SPRED3Q2MJR0 410 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 UNC50Q53HI1 259 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 ACSBG2Q5FVE4 666 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 PIP5KL1Q5T9C9 394 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 ZNF776Q68DI1 518 aaPredicted RBP15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 EPGNQ6UW88 154 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 EZH1Q92800 747 aaPredicted RBP15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 TUBB6Q9BUF5 446 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 FBRSQ9HAH7 460 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 SAR1AQ9NR31 198 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 NUDT4Q9NZJ9 180 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 LIMD1Q9UGP4 676 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 COQ6Q9Y2Z9 468 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 FADS3Q9Y5Q0 445 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 RAD51BO15315 384 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 MID1O15344 667 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 MBTPS2O43462 519 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 TSPAN6O43657 245 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 AP1G1O43747 822 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 MTX2O75431 263 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 SERPINA6P08185 405 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 AOAHP28039 575 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 CCR7P32248 378 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 ACTN3Q08043 901 aaPredicted RBP15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 GRSF1Q12849 480 aaKnown RBP eCLIP15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 PON2Q15165 354 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 TGFBIQ15582 683 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 C2orf27AQ580R0 203 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 CUZD1Q86UP6 607 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 NLRP8Q86W28 1048 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 SLC44A3Q8N4M1 653 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 DEFB123Q8N688 67 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 OR2T3Q8NH03 318 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 STON2Q8WXE9 905 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 GABRG3Q99928 467 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 ZCCHC2Q9C0B9 1178 aaKnown RBP15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 HEBP1Q9NRV9 189 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 SORCS3Q9UPU3 1222 aa15.48■□□□□ 0.07
HERPUD1-201ENST00000300302 NCF1BA6NI72 391 aaPredicted RBP15.47■□□□□ 0.07
HERPUD1-201ENST00000300302 TRPC5OSA6NMA1 111 aa15.47■□□□□ 0.07
HERPUD1-201ENST00000300302 NCF1CA8MVU1 366 aaPredicted RBP15.47■□□□□ 0.07
HERPUD1-201ENST00000300302 NCF1P14598 390 aaPredicted RBP15.47■□□□□ 0.07
HERPUD1-201ENST00000300302 EEF1DP29692 281 aaKnown RBP15.47■□□□□ 0.07
HERPUD1-201ENST00000300302 DRD3P35462 400 aa15.47■□□□□ 0.07
HERPUD1-201ENST00000300302 GPR1P46091 355 aa15.47■□□□□ 0.07
HERPUD1-201ENST00000300302 TMEM196Q5HYL7 178 aa15.47■□□□□ 0.07
HERPUD1-201ENST00000300302 PLEKHS1Q5SXH7 462 aa15.47■□□□□ 0.07
HERPUD1-201ENST00000300302 FAM91A1Q658Y4 838 aa15.47■□□□□ 0.07
HERPUD1-201ENST00000300302 ANKS6Q68DC2 871 aa15.47■□□□□ 0.07
HERPUD1-201ENST00000300302 SBSNQ6UWP8 590 aa15.47■□□□□ 0.07
HERPUD1-201ENST00000300302 AADATQ8N5Z0 425 aa15.47■□□□□ 0.07
HERPUD1-201ENST00000300302 C1QTNF3Q9BXJ4 246 aa15.47■□□□□ 0.07
HERPUD1-201ENST00000300302 NMUR2Q9GZQ4 415 aa15.47■□□□□ 0.07
HERPUD1-201ENST00000300302 TSR3Q9UJK0 312 aaKnown RBP15.47■□□□□ 0.07
HERPUD1-201ENST00000300302 CKAP5Q14008 2032 aa15.47■□□□□ 0.07
HERPUD1-201ENST00000300302 UNC80Q8N2C7 3258 aa15.47■□□□□ 0.07
HERPUD1-201ENST00000300302 MYO1CO00159 1063 aa15.46■□□□□ 0.07
HERPUD1-201ENST00000300302 UNC5CO95185 931 aa15.46■□□□□ 0.07
HERPUD1-201ENST00000300302 SIX3O95343 332 aaPredicted RBP15.46■□□□□ 0.07
HERPUD1-201ENST00000300302 EGFP01133 1207 aa15.46■□□□□ 0.07
HERPUD1-201ENST00000300302 TMEM115Q12893 351 aaPredicted RBP15.46■□□□□ 0.07
HERPUD1-201ENST00000300302 TBCCQ15814 346 aa15.46■□□□□ 0.07
HERPUD1-201ENST00000300302 VWA5B1Q5TIE3 1220 aa15.46■□□□□ 0.07
HERPUD1-201ENST00000300302 METTL21CQ5VZV1 264 aa15.46■□□□□ 0.07
HERPUD1-201ENST00000300302 RAET1GQ6H3X3 334 aa15.46■□□□□ 0.07
HERPUD1-201ENST00000300302 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.46■□□□□ 0.07
HERPUD1-201ENST00000300302 ACAD11Q709F0 780 aa15.46■□□□□ 0.07
HERPUD1-201ENST00000300302 HDDC3Q8N4P3 179 aa15.46■□□□□ 0.07
HERPUD1-201ENST00000300302 PHF7Q9BWX1 381 aaPredicted RBP15.46■□□□□ 0.07
HERPUD1-201ENST00000300302 UTP6Q9NYH9 597 aaKnown RBP15.46■□□□□ 0.07
HERPUD1-201ENST00000300302 OARD1Q9Y530 152 aa15.46■□□□□ 0.07
HERPUD1-201ENST00000300302 TNPO3Q9Y5L0 923 aaKnown RBP15.46■□□□□ 0.07
HERPUD1-201ENST00000300302 PIKFYVEQ9Y2I7 2098 aa15.46■□□□□ 0.07
HERPUD1-201ENST00000300302 INPP4BO15327 924 aa15.46■□□□□ 0.06
HERPUD1-201ENST00000300302 GRID2O43424 1007 aa15.46■□□□□ 0.06
HERPUD1-201ENST00000300302 HNRNPCL1O60812 293 aaKnown RBP15.46■□□□□ 0.06
HERPUD1-201ENST00000300302 ATG13O75143 517 aa15.46■□□□□ 0.06
HERPUD1-201ENST00000300302 FSBPO95073 299 aa15.46■□□□□ 0.06
HERPUD1-201ENST00000300302 GLULP15104 373 aa15.46■□□□□ 0.06
HERPUD1-201ENST00000300302 RASSF2P50749 326 aa15.46■□□□□ 0.06
HERPUD1-201ENST00000300302 HK3P52790 923 aa15.46■□□□□ 0.06
HERPUD1-201ENST00000300302 HSPA14Q0VDF9 509 aa15.46■□□□□ 0.06
HERPUD1-201ENST00000300302 TUBB3Q13509 450 aa15.46■□□□□ 0.06
HERPUD1-201ENST00000300302 KRT72Q14CN4 511 aa15.46■□□□□ 0.06
HERPUD1-201ENST00000300302 PPP1R3AQ16821 1122 aa15.46■□□□□ 0.06
HERPUD1-201ENST00000300302 KHDC1Q4VXA5 237 aaKnown RBP15.46■□□□□ 0.06
HERPUD1-201ENST00000300302 AGBL4Q5VU57 503 aa15.46■□□□□ 0.06
HERPUD1-201ENST00000300302 RPS27LQ71UM5 84 aaKnown RBP15.46■□□□□ 0.06
HERPUD1-201ENST00000300302 CACUL1Q86Y37 369 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms