RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 EURLQ9NYK6 297 aa20.84■□□□□ 0.93
SMCO4-201ENST00000298966 PSMC3IPQ9P2W1 217 aaPredicted RBP20.84■□□□□ 0.93
SMCO4-201ENST00000298966 ZNF180Q9UJW8 692 aa20.84■□□□□ 0.93
SMCO4-201ENST00000298966 ACSL6Q9UKU0 697 aa20.84■□□□□ 0.93
SMCO4-201ENST00000298966 TLDC2A0PJX2 215 aa20.83■□□□□ 0.93
SMCO4-201ENST00000298966 FAM159BA6NKW6 160 aa20.83■□□□□ 0.93
SMCO4-201ENST00000298966 NTN3O00634 580 aaPredicted RBP20.83■□□□□ 0.93
SMCO4-201ENST00000298966 CASC3O15234 703 aaKnown RBP20.83■□□□□ 0.93
SMCO4-201ENST00000298966 HTRA2O43464 458 aaPredicted RBP20.83■□□□□ 0.93
SMCO4-201ENST00000298966 FZD6O60353 706 aa20.83■□□□□ 0.93
SMCO4-201ENST00000298966 NOBOXO60393 691 aa20.83■□□□□ 0.93
SMCO4-201ENST00000298966 ZNF821O75541 412 aaPredicted RBP20.83■□□□□ 0.93
SMCO4-201ENST00000298966 CRTAMO95727 393 aa20.83■□□□□ 0.93
SMCO4-201ENST00000298966 FAM87AP0C7U9 286 aa20.83■□□□□ 0.93
SMCO4-201ENST00000298966 MSH2P43246 934 aa20.83■□□□□ 0.93
SMCO4-201ENST00000298966 OLIG2Q13516 323 aa20.83■□□□□ 0.93
SMCO4-201ENST00000298966 IHHQ14623 411 aa20.83■□□□□ 0.93
SMCO4-201ENST00000298966 MYLK3Q32MK0 819 aa20.83■□□□□ 0.93
SMCO4-201ENST00000298966 LGSNQ5TDP6 509 aa20.83■□□□□ 0.93
SMCO4-201ENST00000298966 PDPK2PQ6A1A2 396 aa20.83■□□□□ 0.93
SMCO4-201ENST00000298966 LMNTD2Q8IXW0 634 aa20.83■□□□□ 0.93
SMCO4-201ENST00000298966 SLC25A41Q8N5S1 370 aa20.83■□□□□ 0.93
SMCO4-201ENST00000298966 ASB12Q8WXK4 309 aa20.83■□□□□ 0.93
SMCO4-201ENST00000298966 ZNF669Q96BR6 464 aaPredicted RBP20.83■□□□□ 0.93
SMCO4-201ENST00000298966 CERS2Q96G23 380 aa20.83■□□□□ 0.93
SMCO4-201ENST00000298966 GFM1Q96RP9 751 aaKnown RBP20.83■□□□□ 0.93
SMCO4-201ENST00000298966 HEPHQ9BQS7 1158 aa20.83■□□□□ 0.93
SMCO4-201ENST00000298966 DHRS4Q9BTZ2 278 aa20.83■□□□□ 0.93
SMCO4-201ENST00000298966 OSBPL1AQ9BXW6 950 aa20.83■□□□□ 0.93
SMCO4-201ENST00000298966 SLC13A1Q9BZW2 595 aa20.83■□□□□ 0.93
SMCO4-201ENST00000298966 TM6SF2Q9BZW4 377 aa20.83■□□□□ 0.93
SMCO4-201ENST00000298966 TCEAL2Q9H3H9 227 aaPredicted RBP20.83■□□□□ 0.93
SMCO4-201ENST00000298966 LRRK2Q5S007 2527 aa20.83■□□□□ 0.92
SMCO4-201ENST00000298966 IGLON5A6NGN9 336 aa20.82■□□□□ 0.92
SMCO4-201ENST00000298966 ANKRD66B4E2M5 251 aa20.82■□□□□ 0.92
SMCO4-201ENST00000298966 NEMP1O14524 444 aa20.82■□□□□ 0.92
SMCO4-201ENST00000298966 POLR3GO15318 223 aaPredicted RBP20.82■□□□□ 0.92
SMCO4-201ENST00000298966 TSPAN6O43657 245 aa20.82■□□□□ 0.92
SMCO4-201ENST00000298966 PGLSO95336 258 aa20.82■□□□□ 0.92
SMCO4-201ENST00000298966 LIPCP11150 499 aa20.82■□□□□ 0.92
SMCO4-201ENST00000298966 TPH1P17752 444 aa20.82■□□□□ 0.92
SMCO4-201ENST00000298966 MGAT5Q09328 741 aa20.82■□□□□ 0.92
SMCO4-201ENST00000298966 TRAF2Q12933 501 aa20.82■□□□□ 0.92
SMCO4-201ENST00000298966 SRSF6Q13247 344 aaKnown RBP20.82■□□□□ 0.92
SMCO4-201ENST00000298966 MSLNQ13421 630 aaPredicted RBP20.82■□□□□ 0.92
SMCO4-201ENST00000298966 POU6F1Q14863 301 aa20.82■□□□□ 0.92
SMCO4-201ENST00000298966 MANEAQ5SRI9 462 aa20.82■□□□□ 0.92
SMCO4-201ENST00000298966 ATXN7L2Q5T6C5 722 aaPredicted RBP20.82■□□□□ 0.92
SMCO4-201ENST00000298966 KIAA0930Q6ICG6 404 aaPredicted RBP20.82■□□□□ 0.92
SMCO4-201ENST00000298966 CAPN12Q6ZSI9 719 aa20.82■□□□□ 0.92
SMCO4-201ENST00000298966 MARK2Q7KZI7 788 aaKnown RBP20.82■□□□□ 0.92
SMCO4-201ENST00000298966 PARS2Q7L3T8 475 aaKnown RBP20.82■□□□□ 0.92
SMCO4-201ENST00000298966 TAOK1Q7L7X3 1001 aa20.82■□□□□ 0.92
SMCO4-201ENST00000298966 ZSCAN1Q8NBB4 408 aa20.82■□□□□ 0.92
SMCO4-201ENST00000298966 HCAR2Q8TDS4 363 aa20.82■□□□□ 0.92
SMCO4-201ENST00000298966 LRRC61Q9BV99 259 aa20.82■□□□□ 0.92
SMCO4-201ENST00000298966 PLAC1Q9HBJ0 212 aa20.82■□□□□ 0.92
SMCO4-201ENST00000298966 PIH1D1Q9NWS0 290 aaKnown RBP20.82■□□□□ 0.92
SMCO4-201ENST00000298966 SENP1Q9P0U3 644 aa20.82■□□□□ 0.92
SMCO4-201ENST00000298966 GULP1Q9UBP9 304 aa20.82■□□□□ 0.92
SMCO4-201ENST00000298966 DOLKQ9UPQ8 538 aa20.82■□□□□ 0.92
SMCO4-201ENST00000298966 UNC13CQ8NB66 2214 aa20.81■□□□□ 0.92
SMCO4-201ENST00000298966 SMIM23A6NLE4 172 aa20.81■□□□□ 0.92
SMCO4-201ENST00000298966 YY2O15391 372 aa20.81■□□□□ 0.92
SMCO4-201ENST00000298966 INHBAP08476 426 aa20.81■□□□□ 0.92
SMCO4-201ENST00000298966 JMJD7P0C870 316 aa20.81■□□□□ 0.92
SMCO4-201ENST00000298966 CNTFP26441 200 aa20.81■□□□□ 0.92
SMCO4-201ENST00000298966 CHRNA4P43681 627 aa20.81■□□□□ 0.92
SMCO4-201ENST00000298966 SLCO1A2P46721 670 aa20.81■□□□□ 0.92
SMCO4-201ENST00000298966 SERPINB9P50453 376 aa20.81■□□□□ 0.92
SMCO4-201ENST00000298966 CCNHP51946 323 aaPredicted RBP20.81■□□□□ 0.92
SMCO4-201ENST00000298966 CRADDP78560 199 aa20.81■□□□□ 0.92
SMCO4-201ENST00000298966 KBTBD12Q3ZCT8 623 aa20.81■□□□□ 0.92
SMCO4-201ENST00000298966 KCTD16Q68DU8 428 aa20.81■□□□□ 0.92
SMCO4-201ENST00000298966 ADGRD1Q6QNK2 874 aa20.81■□□□□ 0.92
SMCO4-201ENST00000298966 B3GNT8Q7Z7M8 397 aa20.81■□□□□ 0.92
SMCO4-201ENST00000298966 SLC26A11Q86WA9 606 aa20.81■□□□□ 0.92
SMCO4-201ENST00000298966 RYBPQ8N488 228 aaPredicted RBP20.81■□□□□ 0.92
SMCO4-201ENST00000298966 SLC44A1Q8WWI5 657 aa20.81■□□□□ 0.92
SMCO4-201ENST00000298966 SCG3Q8WXD2 468 aaKnown RBP20.81■□□□□ 0.92
SMCO4-201ENST00000298966 RAB7BQ96AH8 199 aa20.81■□□□□ 0.92
SMCO4-201ENST00000298966 PAFAH2Q99487 392 aa20.81■□□□□ 0.92
SMCO4-201ENST00000298966 TREX1Q9NSU2 369 aa20.81■□□□□ 0.92
SMCO4-201ENST00000298966 NOVA2Q9UNW9 492 aaKnown RBP20.81■□□□□ 0.92
SMCO4-201ENST00000298966 CHKBQ9Y259 395 aa20.81■□□□□ 0.92
SMCO4-201ENST00000298966 PCDHGC4Q9Y5F7 938 aa20.81■□□□□ 0.92
SMCO4-201ENST00000298966 SCN8AQ9UQD0 1980 aa20.81■□□□□ 0.92
SMCO4-201ENST00000298966 IQANK1A0A1B0GTG1 560 aa20.8■□□□□ 0.92
SMCO4-201ENST00000298966 ZCWPW2A0A1B0GU75 182 aa20.8■□□□□ 0.92
SMCO4-201ENST00000298966 TTC24A2A3L6 582 aaPredicted RBP20.8■□□□□ 0.92
SMCO4-201ENST00000298966 MROH6A6NGR9 719 aa20.8■□□□□ 0.92
SMCO4-201ENST00000298966 TRAFD1O14545 582 aaPredicted RBP20.8■□□□□ 0.92
SMCO4-201ENST00000298966 PRLP01236 227 aa20.8■□□□□ 0.92
SMCO4-201ENST00000298966 C1QAP02745 245 aa20.8■□□□□ 0.92
SMCO4-201ENST00000298966 GCAP28676 217 aa20.8■□□□□ 0.92
SMCO4-201ENST00000298966 EPHB1P54762 984 aa20.8■□□□□ 0.92
SMCO4-201ENST00000298966 POLR2LP62875 67 aaKnown RBP20.8■□□□□ 0.92
SMCO4-201ENST00000298966 CBX1P83916 185 aa20.8■□□□□ 0.92
SMCO4-201ENST00000298966 TAF1AQ15573 450 aaPredicted RBP20.8■□□□□ 0.92
SMCO4-201ENST00000298966 SKIDA1Q1XH10 827 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms