RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 ITGB6P18564 788 aa15.33■□□□□ 0.05
LSM6-201ENST00000296581 CUL3Q13618 768 aa15.33■□□□□ 0.05
LSM6-201ENST00000296581 ZNF284Q2VY69 593 aa15.33■□□□□ 0.05
LSM6-201ENST00000296581 TMEM52BQ4KMG9 183 aa15.33■□□□□ 0.05
LSM6-201ENST00000296581 UNC50Q53HI1 259 aa15.33■□□□□ 0.05
LSM6-201ENST00000296581 EPGNQ6UW88 154 aa15.33■□□□□ 0.05
LSM6-201ENST00000296581 ALYREFQ86V81 257 aaKnown RBP15.33■□□□□ 0.05
LSM6-201ENST00000296581 MYLK4Q86YV6 388 aaPredicted RBP15.33■□□□□ 0.05
LSM6-201ENST00000296581 ZBTB2Q8N680 514 aa15.33■□□□□ 0.05
LSM6-201ENST00000296581 DDHD1Q8NEL9 900 aa15.33■□□□□ 0.05
LSM6-201ENST00000296581 EXT2Q93063 718 aa15.33■□□□□ 0.05
LSM6-201ENST00000296581 DTD2Q96FN9 168 aa15.33■□□□□ 0.05
LSM6-201ENST00000296581 VPS35Q96QK1 796 aa15.33■□□□□ 0.05
LSM6-201ENST00000296581 COG4Q9H9E3 785 aa15.33■□□□□ 0.05
LSM6-201ENST00000296581 DYRK4Q9NR20 520 aa15.33■□□□□ 0.05
LSM6-201ENST00000296581 DPPA5A6NC42 116 aa15.33■□□□□ 0.04
LSM6-201ENST00000296581 FADS2P1A8MWK0 482 aa15.33■□□□□ 0.04
LSM6-201ENST00000296581 K7EQS6 105 aa15.33■□□□□ 0.04
LSM6-201ENST00000296581 FCHO1O14526 889 aa15.33■□□□□ 0.04
LSM6-201ENST00000296581 DGKAP23743 735 aa15.33■□□□□ 0.04
LSM6-201ENST00000296581 TPP2P29144 1249 aaPredicted RBP15.33■□□□□ 0.04
LSM6-201ENST00000296581 KIR2DL1P43626 348 aaPredicted RBP15.33■□□□□ 0.04
LSM6-201ENST00000296581 RGS4P49798 205 aa15.33■□□□□ 0.04
LSM6-201ENST00000296581 CREB5Q02930 508 aa15.33■□□□□ 0.04
LSM6-201ENST00000296581 CAMK2GQ13555 558 aaPredicted RBP15.33■□□□□ 0.04
LSM6-201ENST00000296581 ACOX1Q15067 660 aa15.33■□□□□ 0.04
LSM6-201ENST00000296581 AAK1Q2M2I8 961 aa15.33■□□□□ 0.04
LSM6-201ENST00000296581 RAB44Q7Z6P3 723 aaPredicted RBP15.33■□□□□ 0.04
LSM6-201ENST00000296581 WRAP53Q9BUR4 548 aaKnown RBP15.33■□□□□ 0.04
LSM6-201ENST00000296581 EML4Q9HC35 981 aaKnown RBP15.33■□□□□ 0.04
LSM6-201ENST00000296581 SAR1AQ9NR31 198 aa15.33■□□□□ 0.04
LSM6-201ENST00000296581 VTI1BQ9UEU0 232 aa15.33■□□□□ 0.04
LSM6-201ENST00000296581 APOBEC2Q9Y235 224 aaKnown RBP15.33■□□□□ 0.04
LSM6-201ENST00000296581 SUPT3HB4E1H0 165 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 HDAC3O15379 428 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 GRID2O43424 1007 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 MAGEC1O60732 1142 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 SUPT3HO75486 399 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 OR56A5P0C7T3 313 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 GFAPP14136 432 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 IGFBP4P22692 258 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 PSMD8P48556 350 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 NCALDP61601 193 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 PFKFB4Q16877 469 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 FAM46CQ5VWP2 391 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 ZNF765Q7L2R6 523 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 CHPFQ8IZ52 775 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 FBXO39Q8N4B4 442 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 MAPK15Q8TD08 544 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 BTN2A2Q8WVV5 523 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 RAB7BQ96AH8 199 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 RILPQ96NA2 401 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 NMUR2Q9GZQ4 415 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 RSPH9Q9H1X1 276 aaPredicted RBP15.32■□□□□ 0.04
LSM6-201ENST00000296581 TRPV5Q9NQA5 729 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 KCTD5Q9NXV2 234 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 A0A1W2PPC1 479 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 GRXCR2A6NFK2 248 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 CFAP99D6REC4 459 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 STX16-NPEPL1H3BU86 382 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 PLK4O00444 970 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 STX16O14662 325 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 CCDC22O60826 627 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 AP2A2O94973 939 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 UNC5CO95185 931 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 SERPINA6P08185 405 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 ATP1B2P14415 290 aaPredicted RBP15.32■□□□□ 0.04
LSM6-201ENST00000296581 P2RY2P41231 377 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 HK3P52790 923 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 TTLL9Q3SXZ7 439 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 ACSBG2Q5FVE4 666 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 VWA5B1Q5TIE3 1220 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 SEL1L3Q68CR1 1132 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 ADAMTSL2Q86TH1 951 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 GPSM1Q86YR5 675 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 TEX9Q8N6V9 391 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 AGR3Q8TD06 166 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 AP2M1Q96CW1 435 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 PRR11Q96HE9 360 aaPredicted RBP15.32■□□□□ 0.04
LSM6-201ENST00000296581 C1QTNF3Q9BXJ4 246 aa15.32■□□□□ 0.04
LSM6-201ENST00000296581 CFAP73A6NFT4 308 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 EIF3FO00303 357 aaPredicted RBP15.31■□□□□ 0.04
LSM6-201ENST00000296581 ATP5HO75947 161 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 SUPT7LO94864 414 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 CBSLP0DN79 551 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 T-ENOLP0DO92 83 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 CTHP32929 405 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 CBSP35520 551 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 NAA20P61599 178 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 TXNDC11Q6PKC3 985 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 SBSNQ6UWP8 590 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 CUZD1Q86UP6 607 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 MYO1HQ8N1T3 1032 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 DCUN1D1Q96GG9 259 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 ASB2Q96Q27 587 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 SHCBP1LQ9BZQ2 653 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 TXLNGQ9NUQ3 528 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 NUDT4Q9NZJ9 180 aa15.31■□□□□ 0.04
LSM6-201ENST00000296581 MBD1Q9UIS9 605 aaPredicted RBP15.31■□□□□ 0.04
LSM6-201ENST00000296581 SPECC1L-ADORA2AF8WAN1 911 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms