RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 HOPXQ9BPY8 73 aaPredicted RBP15.98■□□□□ 0.15
SSRP1-202ENST00000293880 MRPL9Q9BYD2 267 aaKnown RBP15.98■□□□□ 0.15
SSRP1-202ENST00000293880 ST3GAL5Q9UNP4 418 aa15.98■□□□□ 0.15
SSRP1-202ENST00000293880 OR2AG2A6NM03 316 aa15.98■□□□□ 0.15
SSRP1-202ENST00000293880 AIREO43918 545 aa15.98■□□□□ 0.15
SSRP1-202ENST00000293880 RSL1D1O76021 490 aaKnown RBP15.98■□□□□ 0.15
SSRP1-202ENST00000293880 KCNA5P22460 613 aa15.98■□□□□ 0.15
SSRP1-202ENST00000293880 NMBRP28336 390 aa15.98■□□□□ 0.15
SSRP1-202ENST00000293880 PIWIL4Q7Z3Z4 852 aaKnown RBP15.98■□□□□ 0.15
SSRP1-202ENST00000293880 FITM2Q8N6M3 262 aa15.98■□□□□ 0.15
SSRP1-202ENST00000293880 TUBGCP5Q96RT8 1024 aa15.98■□□□□ 0.15
SSRP1-202ENST00000293880 MST1RQ04912 1400 aa15.98■□□□□ 0.15
SSRP1-202ENST00000293880 AXIN1O15169 862 aa15.98■□□□□ 0.15
SSRP1-202ENST00000293880 SEMG2Q02383 582 aa15.98■□□□□ 0.15
SSRP1-202ENST00000293880 ZYG11AQ6WRX3 759 aa15.98■□□□□ 0.15
SSRP1-202ENST00000293880 IRF2BP2Q7Z5L9 587 aa15.98■□□□□ 0.15
SSRP1-202ENST00000293880 GPATCH1Q9BRR8 931 aaKnown RBP15.98■□□□□ 0.15
SSRP1-202ENST00000293880 XKRYO14609 159 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 GABBR2O75899 941 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 CTNNB1P35222 781 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 DSC2Q02487 901 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 IL23RQ5VWK5 629 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 ACMSDQ8TDX5 336 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 ESAMQ96AP7 390 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 CYP2S1Q96SQ9 504 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 NXF3Q9H4D5 531 aaKnown RBP15.97■□□□□ 0.15
SSRP1-202ENST00000293880 TREM1Q9NP99 234 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 FKBP7Q9Y680 259 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 URADA6NGE7 173 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 DHX15O43143 795 aaKnown RBP15.97■□□□□ 0.15
SSRP1-202ENST00000293880 RPP40O75818 363 aaKnown RBP15.97■□□□□ 0.15
SSRP1-202ENST00000293880 VGLL4Q14135 290 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 CNPY1Q3B7I2 92 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 RBFAQ8N0V3 343 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 OR10A6Q8NH74 314 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 COQ10BQ9H8M1 238 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 GLYATL1P3A0A0U1RQE8 302 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 ALOX15BO15296 676 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 IPO13O94829 963 aaKnown RBP15.97■□□□□ 0.15
SSRP1-202ENST00000293880 PGLSO95336 258 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 TGFB3P10600 412 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 MTHFD1P11586 935 aaKnown RBP15.97■□□□□ 0.15
SSRP1-202ENST00000293880 RPS9P46781 194 aaKnown RBP15.97■□□□□ 0.15
SSRP1-202ENST00000293880 MTPNP58546 118 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 PPP1R15BQ5SWA1 713 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 PLCZ1Q86YW0 608 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 OR10H4Q8NGA5 316 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 DPEP3Q9H4B8 488 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 HECAQ9UBI9 543 aaPredicted RBP15.97■□□□□ 0.15
SSRP1-202ENST00000293880 LRRIQ1Q96JM4 1722 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 FAM86C2PA6NEL3 165 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 C1QTNF3-AMACRE9PGA6 284 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 WNT10BO00744 389 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 RPL3P39023 403 aaKnown RBP15.97■□□□□ 0.15
SSRP1-202ENST00000293880 XIAPP98170 497 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 GRM3Q14832 879 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 BEND5Q7L4P6 421 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 ZNF627Q7L945 461 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 NIPA1Q7RTP0 329 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 DNAJC19Q96DA6 116 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 PCDH10Q9P2E7 1040 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 ELOVL7A1L3X0 281 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 SLC35F4A4IF30 521 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 QSOX1O00391 747 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 CHST10O43529 356 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 SNX4O95219 450 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 FGBP02675 491 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 GRK5P34947 590 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 IGFALSP35858 605 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 KHDC1Q4VXA5 237 aaKnown RBP15.97■□□□□ 0.15
SSRP1-202ENST00000293880 SPATA22Q8NHS9 363 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 ADAMTS15Q8TE58 950 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 TIMMDC1Q9NPL8 285 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 SMPD3Q9NY59 655 aaPredicted RBP15.97■□□□□ 0.15
SSRP1-202ENST00000293880 GULP1Q9UBP9 304 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 EVLQ9UI08 416 aaPredicted RBP15.97■□□□□ 0.15
SSRP1-202ENST00000293880 MGAT4AQ9UM21 535 aa15.97■□□□□ 0.15
SSRP1-202ENST00000293880 UGT1A9O60656 530 aa15.96■□□□□ 0.15
SSRP1-202ENST00000293880 SCGB1D2O95969 90 aa15.96■□□□□ 0.15
SSRP1-202ENST00000293880 DLG1Q12959 904 aa15.96■□□□□ 0.15
SSRP1-202ENST00000293880 ZNF267Q14586 743 aaPredicted RBP15.96■□□□□ 0.15
SSRP1-202ENST00000293880 COLEC12Q5KU26 742 aa15.96■□□□□ 0.15
SSRP1-202ENST00000293880 TMEM214Q6NUQ4 689 aaKnown RBP15.96■□□□□ 0.15
SSRP1-202ENST00000293880 P2RY8Q86VZ1 359 aa15.96■□□□□ 0.15
SSRP1-202ENST00000293880 ZMIZ2Q8NF64 920 aa15.96■□□□□ 0.15
SSRP1-202ENST00000293880 KCNC2Q96PR1 638 aa15.96■□□□□ 0.15
SSRP1-202ENST00000293880 UGT1A7Q9HAW7 530 aa15.96■□□□□ 0.15
SSRP1-202ENST00000293880 UGT1A10Q9HAW8 530 aa15.96■□□□□ 0.15
SSRP1-202ENST00000293880 UGT1A8Q9HAW9 530 aa15.96■□□□□ 0.15
SSRP1-202ENST00000293880 NECTIN3Q9NQS3 549 aa15.96■□□□□ 0.15
SSRP1-202ENST00000293880 GMIPQ9P107 970 aa15.96■□□□□ 0.15
SSRP1-202ENST00000293880 COMMD3Q9UBI1 195 aa15.96■□□□□ 0.15
SSRP1-202ENST00000293880 CNTNAP1P78357 1384 aa15.96■□□□□ 0.15
SSRP1-202ENST00000293880 PIP5K1BO14986 540 aa15.96■□□□□ 0.15
SSRP1-202ENST00000293880 TM7SF2O76062 418 aa15.96■□□□□ 0.15
SSRP1-202ENST00000293880 DENND2DQ9H6A0 471 aaPredicted RBP15.96■□□□□ 0.15
SSRP1-202ENST00000293880 LOC100509620A0A075B734 347 aa15.96■□□□□ 0.15
SSRP1-202ENST00000293880 TTC24A2A3L6 582 aaPredicted RBP15.96■□□□□ 0.15
SSRP1-202ENST00000293880 LHCGRP22888 699 aa15.96■□□□□ 0.15
SSRP1-202ENST00000293880 ZNF135P52742 658 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms