RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 PCDHGA11Q9Y5H2 935 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 CPQQ9Y646 472 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 STYXL1Q9Y6J8 313 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 FAM159BA6NKW6 160 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 CCL16O15467 120 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 RGS10O43665 173 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 STBD1O95210 358 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 IMPDH1P20839 514 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 DCAF12L1Q5VU92 463 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 DCAKDQ8WVC6 231 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 PLK2Q9NYY3 685 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 RUVBL1Q9Y265 456 aaKnown RBP12.65□□□□□ -0.38
PTCD1-201ENST00000292478 FZD9O00144 591 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 KLF11O14901 512 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 PIP5K1BO14986 540 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 ZNF132P52740 706 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 KCNJ11Q14654 390 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 LARS2Q15031 903 aaKnown RBP12.65□□□□□ -0.38
PTCD1-201ENST00000292478 PRKD1Q15139 912 aaPredicted RBP12.65□□□□□ -0.38
PTCD1-201ENST00000292478 LINGO4Q6UY18 593 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 LDB1Q86U70 411 aaPredicted RBP12.65□□□□□ -0.38
PTCD1-201ENST00000292478 ADGRG2Q8IZP9 1017 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 POC5Q8NA72 575 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 CLHC1Q8NHS4 586 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 CIB1Q99828 191 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 TLL2Q9Y6L7 1015 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 FAM234BA2RU67 622 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 FADS2P1A8MWK0 482 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 TNFRSF11BO00300 401 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 DNM1LO00429 736 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 OR4F21O95013 312 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 SPATA31D3P0C874 917 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 NDUFA5Q16718 116 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 ISLR2Q6UXK2 745 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 SPATA31D4Q6ZUB0 917 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 ZNF514Q96K75 400 aaPredicted RBP12.65□□□□□ -0.38
PTCD1-201ENST00000292478 MCMBPQ9BTE3 642 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 TRIM8Q9BZR9 551 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 OXSMQ9NWU1 459 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 IFNW1P05000 195 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 CAPN1P07384 714 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 HSD17B2P37059 387 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 CHIT1Q13231 466 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 SF1Q15637 639 aaKnown RBP12.65□□□□□ -0.38
PTCD1-201ENST00000292478 KLHL12Q53G59 568 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 TMC8Q8IU68 726 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 C12orf65Q9H3J6 166 aaKnown RBP12.65□□□□□ -0.38
PTCD1-201ENST00000292478 MTRRQ9UBK8 725 aa12.65□□□□□ -0.38
PTCD1-201ENST00000292478 ILVBLA1L0T0 632 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 UBE2QL1A1L167 161 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 A8MUI8 341 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 CA12O43570 354 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 IL1R2P27930 398 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 PTGES3Q15185 160 aaKnown RBP12.64□□□□□ -0.39
PTCD1-201ENST00000292478 MED22Q15528 200 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 ZSWIM7Q19AV6 140 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 RALGPS1Q5JS13 557 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 TMPRSS11AQ6ZMR5 421 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 GALNT13Q8IUC8 556 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 DENND6AQ8IWF6 608 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 SAMD14Q8IZD0 417 aaPredicted RBP12.64□□□□□ -0.39
PTCD1-201ENST00000292478 POLE3Q9NRF9 147 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 TMCC2O75069 709 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 HNMTP50135 292 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 HERVK_113P63132 956 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 EML3Q32P44 896 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 SLC9A4Q6AI14 798 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 MSANTD2Q6P1R3 559 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 TRMT10BQ6PF06 316 aaKnown RBP12.64□□□□□ -0.39
PTCD1-201ENST00000292478 RALGPS2Q86X27 583 aaPredicted RBP12.64□□□□□ -0.39
PTCD1-201ENST00000292478 LIX1Q8N485 282 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 SIDT2Q8NBJ9 832 aaKnown RBP12.64□□□□□ -0.39
PTCD1-201ENST00000292478 UXS1Q8NBZ7 420 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 CLEC4CQ8WTT0 213 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 ERVK-6Q9BXR3 956 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 DUS2Q9NX74 493 aaKnown RBP12.64□□□□□ -0.39
PTCD1-201ENST00000292478 CMTM6Q9NX76 183 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 MAT2BQ9NZL9 334 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 FCF1Q9Y324 198 aaKnown RBP12.64□□□□□ -0.39
PTCD1-201ENST00000292478 SNX10Q9Y5X0 201 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 ADAMTS3O15072 1205 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 PAFAH1B3Q15102 231 aaKnown RBP12.64□□□□□ -0.39
PTCD1-201ENST00000292478 PYDC2Q56P42 97 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 TMEM63BQ5T3F8 832 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 OR10G6Q8NH81 332 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 TMEM27Q9HBJ8 222 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 SERPINA1P01009 418 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 PRKAR1AP10644 381 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 PSMD8P48556 350 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 ZNF697Q5TEC3 545 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 OAFQ86UD1 273 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 NATD1Q8N6N6 113 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 SLC43A3Q8NBI5 491 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 CD99L2Q8TCZ2 262 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 SLC35F5Q8WV83 523 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 ACAT2Q9BWD1 397 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 GPR88Q9GZN0 384 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 TNKS2Q9H2K2 1166 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 H0YC42 278 aa12.64□□□□□ -0.39
PTCD1-201ENST00000292478 LYNP07948 512 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms