RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 OGDHQ02218 1023 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 IGDCC3Q8IVU1 814 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 ZBTB8BQ8NAP8 495 aaPredicted RBP15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 PSMG2Q969U7 264 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 SLC39A8Q9C0K1 460 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 UCKL1Q9NWZ5 548 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 ASF1AQ9Y294 204 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 EFCAB9A8MZ26 197 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 SERPINB7O75635 380 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 C2orf80Q0P641 193 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 ERICH5Q6P6B1 374 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 BHLHB9Q6PI77 547 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 ANKRD23Q86SG2 305 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 DAW1Q8N136 415 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 MUC13Q9H3R2 512 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 NMUR1Q9HB89 426 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 PCDHGA4Q9Y5G9 962 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 MAFBQ9Y5Q3 323 aaPredicted RBP15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 FER1L4A9Z1Z3 1794 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 TRAV19A0A0A6YYK7 116 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 M0R2N6 131 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 SIX3O95343 332 aaPredicted RBP15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 SMAD3P84022 425 aaKnown RBP15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 ZNF730Q6ZMV8 503 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 ERI1Q8IV48 349 aaKnown RBP15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 RNASE11Q8TAA1 199 aaKnown RBP15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 SEC14L1Q92503 715 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 UBE2E3Q969T4 207 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 C11orf24Q96F05 449 aaPredicted RBP15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 KCNC2Q96PR1 638 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 GSDMCQ9BYG8 508 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 C8orf4Q9NR00 106 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 RLN1P04808 185 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 PGRP06401 933 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 MMP3P08254 477 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 ARPC4P59998 168 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 OLR1P78380 273 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 GANABQ14697 944 aaKnown RBP15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 SH3D19Q5HYK7 790 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 OLFML2AQ68BL7 652 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 CHPFQ8IZ52 775 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 OR10Q1Q8NGQ4 319 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 ZFP28Q8NHY6 868 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 STYXQ8WUJ0 223 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 FBXL20Q96IG2 436 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 AMBNQ9NP70 447 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 SNTG1Q9NSN8 517 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 OXSMQ9NWU1 459 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 PPIEQ9UNP9 301 aaKnown RBP15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 DISP2A7MBM2 1401 aa15.17■□□□□ 0.02
SHROOM4-201ENST00000289292 HIST1H2ABP04908 130 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 HIST3H2AQ7L7L0 130 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 OR7D4Q8NG98 312 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 HIST1H2ACQ93077 130 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 SLC35C2Q9NQQ7 365 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 DERAQ9Y315 318 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 KIF1AQ12756 1690 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 PGRMC2O15173 223 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 MATN3O15232 486 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 NCBP2-AS2Q69YL0 99 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 POF1BQ8WVV4 589 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 IGFLR1Q9H665 355 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 RRAGCQ9HB90 399 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 PHF11Q9UIL8 331 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 TULP3O75386 442 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 SNX4O95219 450 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 TFPTP0C1Z6 253 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 SDC2P34741 201 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 PTPN9P43378 593 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 KCNJ11Q14654 390 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 ATAD1Q8NBU5 361 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 ARRDC4Q8NCT1 418 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 NUDT4Q9NZJ9 180 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 SEC14L3Q9UDX4 400 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 FKBPLQ9UIM3 349 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 FCF1Q9Y324 198 aaKnown RBP15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 LTN1O94822 1766 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 ARHGEF33A8MVX0 844 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 ARPC2O15144 300 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 IL1BP01584 269 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 RPL9P32969 192 aaKnown RBP15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 ELP6Q0PNE2 266 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 LCN1P1Q5VSP4 162 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 PIM3Q86V86 326 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 ZNF655Q8N720 491 aaPredicted RBP15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 SLC35B2Q8TB61 432 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 XAGE5Q8WWM1 108 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 BCL9LQ86UU0 1499 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 FAM172BPA6NC97 362 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 CCRL2O00421 344 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 OR10H2O60403 315 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 LINGO3P0C6S8 592 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 SLC7A1P30825 629 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 PTGS2P35354 604 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 SOWAHAQ2M3V2 549 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 HKDC1Q2TB90 917 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 PDE12Q6L8Q7 609 aaKnown RBP15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 EXOSC8Q96B26 276 aaKnown RBP15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 MRIQ9BWK5 157 aa15.16■□□□□ 0.02
SHROOM4-201ENST00000289292 TRIT1Q9H3H1 467 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms