RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 ESR1P03372 595 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 ETV3P41162 512 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 KIAA1024LP59773 190 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 MTAPQ13126 283 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 ZNF528Q3MIS6 628 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 KIAA0895LQ68EN5 471 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 ZCCHC2Q9C0B9 1178 aaKnown RBP8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 SERGEFQ9UGK8 458 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 ZFR2Q9UPR6 939 aaKnown RBP8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 HS3ST3A1Q9Y663 406 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 EIF2S1P05198 315 aaKnown RBP8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 ITGA2BP08514 1039 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 ZNF7P17097 686 aaPredicted RBP8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 MACC1Q6ZN28 852 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 PHYKPLQ8IUZ5 450 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 GBP7Q8N8V2 638 aaPredicted RBP8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 OR2W6PQ8NHA6 318 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 CENPTQ96BT3 561 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 SMIM14Q96QK8 99 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 TEX101Q9BY14 249 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 SZT2Q5T011 3432 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 TNRC6BQ9UPQ9 1833 aaKnown RBP8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 A0A087X1B8 175 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 DIAPH2O60879 1101 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 SERPINI2O75830 405 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 CRABP2P29373 138 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 CXCL12P48061 93 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 CDC16Q13042 620 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 RBBP7Q16576 425 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 FAM151BQ6UXP7 276 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 PTAR1Q7Z6K3 402 aaPredicted RBP8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 PARGQ86W56 976 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 HMGB4Q8WW32 186 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 AP2M1Q96CW1 435 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 COX14Q96I36 57 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 AGAP2Q99490 1192 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 SPATA16Q9BXB7 569 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 ASB8Q9H765 288 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 EXO5Q9H790 373 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 BPIFA1Q9NP55 256 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 ALKBH4Q9NXW9 302 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 WSB2Q9NYS7 404 aaPredicted RBP8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 TDRKHQ9Y2W6 561 aaKnown RBP8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 EIF3FO00303 357 aaPredicted RBP8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 VEGFDO43915 354 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 RECQL5O94762 991 aaPredicted RBP8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 SEMA4FO95754 770 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 SOD1P00441 154 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 FDXRP22570 491 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 NSG1P42857 185 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 SEMA3AQ14563 771 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 CHRNA6Q15825 494 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 BCL7AQ4VC05 210 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 SERPINA9Q86WD7 417 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 UNC5BQ8IZJ1 945 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 C10orf53Q8N6V4 93 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 SNX31Q8N9S9 440 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 RHBGQ9H310 441 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 TBC1D3DA0A087WVF3 549 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 TBC1D3IA0A087WXS9 549 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 TBC1D3EA0A087X179 549 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 TBC1D3KA0A087X1G2 549 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 IGHV1OR15-9A0A0B4J2B8 117 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 A0A0G2JND7 137 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 TBC1D3FA6NER0 549 aaPredicted RBP8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 VGLL3A8MV65 326 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 TBC1D3LB9A6J9 549 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 MMP20O60882 483 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 SPAG7O75391 227 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 WISP3O95389 354 aaPredicted RBP8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 TBC1D3HP0C7X1 549 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 COL6A2P12110 1019 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 ARHGDIAP52565 204 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 BTKQ06187 659 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 BOP1Q14137 746 aaKnown RBP8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 LRRC14Q15048 493 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 TBC1D3GQ6DHY5 549 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 TBC1D3CQ6IPX1 549 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 PSAPL1Q6NUJ1 521 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 UGT3A1Q6NUS8 523 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 PNCKQ6P2M8 343 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 TRABD2AQ86V40 505 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 C10orf67Q8IYJ2 551 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 TBC1D3Q8IZP1 549 aaPredicted RBP8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 OR14C36Q8NHC7 312 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 WRAP53Q9BUR4 548 aaKnown RBP8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 RIOK2Q9BVS4 552 aaKnown RBP8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 RMI1Q9H9A7 625 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 SOHLH2Q9NX45 425 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 MARCH4Q9P2E8 410 aaPredicted RBP8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 DNMT3AQ9Y6K1 912 aaPredicted RBP8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 NCF1BA6NI72 391 aaPredicted RBP8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 NCF1CA8MVU1 366 aaPredicted RBP8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 PLK4O00444 970 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 AHSGP02765 367 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 NCF1P14598 390 aaPredicted RBP8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 HPGDP15428 266 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 PHEXP78562 749 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 IL9RQ01113 521 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 USP10Q14694 798 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms