RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 RPS9P46781 194 aaKnown RBP12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 GALNT2Q10471 571 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 HNRNPDQ14103 355 aaKnown RBP12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 KCNA10Q16322 511 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 PAQR3Q6TCH7 311 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 OR2T34Q8NGX1 318 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 OR2T3Q8NH03 318 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 DHRS4Q9BTZ2 278 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 IRF2BPLQ9H1B7 796 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 TMEM138Q9NPI0 162 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 PTGDR2Q9Y5Y4 395 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 AURKAO14965 403 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 FOXD2O60548 495 aaPredicted RBP12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 CLIC3O95833 236 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 RHOQP17081 205 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 MAPK1P28482 360 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 BCL2L1Q07817 233 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 BNIP2Q12982 314 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 CRY1Q16526 586 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 TMEM214Q6NUQ4 689 aaKnown RBP12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 SPNS2Q8IVW8 549 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 TBC1D21Q8IYX1 336 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 FAM9CQ8IZT9 166 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 SELENOMQ8WWX9 145 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 ASB2Q96Q27 587 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 MIOSQ9NXC5 875 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 DNMT3LQ9UJW3 386 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 A0A1B0GVG6 124 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 MANSC4A6NHS7 340 aaPredicted RBP12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 TBL1XO60907 577 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 RPP40O75818 363 aaKnown RBP12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 CNMDO75829 334 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 SMAD3P84022 425 aaKnown RBP12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 ARF5P84085 180 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 ACAP2Q15057 778 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 HECTD3Q5T447 861 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 SPRYD7Q5W111 196 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 RETSATQ6NUM9 610 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 IKBIPQ70UQ0 350 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 EIF3MQ7L2H7 374 aaKnown RBP12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 CHMP1BQ7LBR1 199 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 CYP4Z1Q86W10 505 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 MRPS31Q92665 395 aaKnown RBP12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 MYDGFQ969H8 173 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 NODALQ96S42 347 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 MTMR10Q9NXD2 777 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 FKBPLQ9UIM3 349 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 PCDHGA10Q9Y5H3 936 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 HS3ST4Q9Y661 456 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 LRRC14BA6NHZ5 514 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 G3V2T6 193 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 PGLSO95336 258 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 LIPEQ05469 1076 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 KIAA0930Q6ICG6 404 aaPredicted RBP12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 PGBD2Q6P3X8 592 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 AFTPHQ6ULP2 937 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 P2RY8Q86VZ1 359 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 PDSS2Q86YH6 399 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 TMEM132CQ8N3T6 1108 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 SIDT2Q8NBJ9 832 aaKnown RBP12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 TSSK3Q96PN8 268 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 AKTIPQ9H8T0 292 aa12.42□□□□□ -0.42
SLC6A1-201ENST00000287766 IFRD1O00458 451 aaPredicted RBP12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 ENPP3O14638 875 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 ULK1O75385 1050 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 ANGPTL1O95841 491 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 F2P00734 622 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 KCNE1P15382 129 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 TRIM32Q13049 653 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 GDF6Q6KF10 455 aaPredicted RBP12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 AHSA2Q719I0 299 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 CPSF7Q8N684 471 aaKnown RBP12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 GRIN3AQ8TCU5 1115 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 TMEM174Q8WUU8 243 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 ARNTL2Q8WYA1 636 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 ADAMTS10Q9H324 1103 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 UCKL1Q9NWZ5 548 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 SPATA7Q9P0W8 599 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 DCLK1O15075 740 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 SNNO75324 88 aaPredicted RBP12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 ALDH1A1P00352 501 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 PKMP14618 531 aaKnown RBP12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 IDO1P14902 403 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 MAGEA8P43361 318 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 NIPAL4Q0D2K0 466 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 VARS2Q5ST30 1063 aaKnown RBP12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 FBXL22Q6P050 247 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 TMEM53Q6P2H8 277 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 KCTD13Q8WZ19 329 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 SYT17Q9BSW7 474 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 TRMOQ9BU70 441 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 KIFC1Q9BW19 673 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 C1orf21Q9H246 121 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 CDK5RAP2Q96SN8 1893 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 NIPSNAP2O75323 286 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 SLC35E2BP0CK96 405 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 PRDX6P30041 224 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 SCNN1AP37088 669 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 HSPA7P48741 367 aa12.41□□□□□ -0.42
SLC6A1-201ENST00000287766 TTPAP49638 278 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms