RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 DPF1Q92782 380 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 CORO2AQ92828 525 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 CCDC77Q9BR77 488 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 TBCDQ9BTW9 1192 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 OSBPL8Q9BZF1 889 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 NCKIPSDQ9NZQ3 722 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 C5AR2Q9P296 337 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 RUVBL2Q9Y230 463 aaKnown RBP2.73□□□□□ -1.97
CHD1-201ENST00000284049 AOX1Q06278 1338 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 EMSYQ7Z589 1322 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 FAM149AA5PLN7 773 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 ANKRD30BLA7E2S9 258 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 CLIC1O00299 241 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 NRG2O14511 850 aaPredicted RBP2.73□□□□□ -1.97
CHD1-201ENST00000284049 CHMP2AO43633 222 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 PEX10O60683 326 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 PRSS23O95084 383 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 ZNF202O95125 648 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 LYL1P12980 280 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 ENO3P13929 434 aaPredicted RBP2.73□□□□□ -1.97
CHD1-201ENST00000284049 KCNA3P22001 575 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 GALP22466 123 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 GLRA2P23416 452 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 CDAP32320 146 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 BLVRAP53004 296 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 PTTG1IPP53801 180 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 ACOX1Q15067 660 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 CPSF6Q16630 551 aaKnown RBP eCLIP2.73□□□□□ -1.97
CHD1-201ENST00000284049 TRIM60Q495X7 471 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 SGO1Q5FBB7 561 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 PTCHD4Q6ZW05 846 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 TRAPPC11Q7Z392 1133 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 CAMK1DQ8IU85 385 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 FAM136AQ96C01 138 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 CNDP1Q96KN2 507 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 WDR24Q96S15 920 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 PHF7Q9BWX1 381 aaPredicted RBP2.73□□□□□ -1.97
CHD1-201ENST00000284049 PCED1AQ9H1Q7 454 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 VCX2Q9H322 139 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 TBC1D17Q9HA65 648 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 MAP2P11137 1827 aaKnown RBP2.73□□□□□ -1.97
CHD1-201ENST00000284049 TRBV2A0A0J9YWF9 115 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 A1L4Q6 167 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 TMCO5BA8MYB1 307 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 KBTBD13C9JR72 458 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 SPECC1L-ADORA2AF8WAN1 911 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 TUBBP07437 444 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 CYP3A4P08684 503 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 KRT19P08727 400 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 PTPN2P17706 415 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 CD58P19256 250 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 HOXC8P31273 242 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 STIP1P31948 543 aaKnown RBP2.73□□□□□ -1.97
CHD1-201ENST00000284049 TAS2R40P59535 323 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 ELP6Q0PNE2 266 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 RNPS1Q15287 305 aaKnown RBP2.73□□□□□ -1.97
CHD1-201ENST00000284049 ELAVL1Q15717 326 aaKnown RBP2.73□□□□□ -1.97
CHD1-201ENST00000284049 PDK4Q16654 411 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 PCGF3Q3KNV8 242 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 TMEM200BQ69YZ2 307 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 CENPPQ6IPU0 288 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 NEK5Q6P3R8 708 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 ACSM6Q6P461 480 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 C1orf229Q6ZS94 237 aaPredicted RBP2.73□□□□□ -1.97
CHD1-201ENST00000284049 ARMCX2Q7L311 632 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 CRIPAKQ8N1N5 446 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 KDM1BQ8NB78 822 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 KAT2AQ92830 837 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 LMF1Q96S06 567 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 TMEM47Q9BQJ4 181 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 UBAC1Q9BSL1 405 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 CACNG6Q9BXT2 260 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 ACTL8Q9H568 366 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 PAK6Q9NQU5 681 aaPredicted RBP2.73□□□□□ -1.97
CHD1-201ENST00000284049 DONSONQ9NYP3 566 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 IL20Q9NYY1 176 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 KIAA1456Q9P272 454 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 C5P01031 1676 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 LINC00854A0A1B0GVQ3 168 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 CPED1A4D0V7 1026 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 FAM90A20PA6NIJ5 464 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 LGALS8O00214 317 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 EEF2KO00418 725 aaKnown RBP2.73□□□□□ -1.97
CHD1-201ENST00000284049 PAGE4O60829 102 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 RHOP08100 348 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 CYP21A2P08686 494 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 NR2F6P10588 404 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 FCGR2AP12318 317 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 EDN2P20800 178 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 HNRNPA2B1P22626 353 aaKnown RBP2.73□□□□□ -1.97
CHD1-201ENST00000284049 HOXA13P31271 388 aaPredicted RBP2.73□□□□□ -1.97
CHD1-201ENST00000284049 HNRNPFP52597 415 aaKnown RBP2.73□□□□□ -1.97
CHD1-201ENST00000284049 RABGGTBP53611 331 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 LPIN1Q14693 890 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 DLG2Q15700 870 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 CR1LQ2VPA4 569 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 CMPK2Q5EBM0 449 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 TMEM63BQ5T3F8 832 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 ALS2CLQ60I27 953 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 TMEM65Q6PI78 240 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms