RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 CDC25CP30307 473 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 OAZ1P54368 228 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 CRADDP78560 199 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 CDK10Q15131 360 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 SHQ1Q6PI26 577 aaKnown RBP8.65□□□□□ -1.03
NIPBL-201ENST00000282516 HAGHLQ6PII5 290 aaPredicted RBP8.65□□□□□ -1.03
NIPBL-201ENST00000282516 NINJ1Q92982 152 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 CHIAQ9BZP6 476 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 MCCC2Q9HCC0 563 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 TRAF6Q9Y4K3 522 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 SCGB1D2O95969 90 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 ITGB1P05556 798 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 ANTXR2P58335 489 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 CPNE9Q8IYJ1 553 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 PDGFDQ9GZP0 370 aaPredicted RBP8.65□□□□□ -1.03
NIPBL-201ENST00000282516 PIGBOS1A0A0B4J2F0 54 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 A0A0G2JMP0 313 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 E2F3O00716 465 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 ADH1AP07327 375 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 SLC2A2P11168 524 aaPredicted RBP8.64□□□□□ -1.03
NIPBL-201ENST00000282516 ALG10BQ5I7T1 473 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 ZBTB2Q8N680 514 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 OR4M2Q8NGB6 313 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 NODALQ96S42 347 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 ARL5AQ9Y689 179 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 VSTM5A8MXK1 200 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 PRKD3O94806 890 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 ZNF14P17017 642 aaPredicted RBP8.64□□□□□ -1.03
NIPBL-201ENST00000282516 CCR10P46092 362 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 CRYBG2Q8N1P7 616 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 OR6K6Q8NGW6 343 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 RHBDF1Q96CC6 855 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 KLHL15Q96M94 604 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 ZFP3Q96NJ6 502 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 TMEM121BQ9BXQ6 578 aaPredicted RBP8.64□□□□□ -1.03
NIPBL-201ENST00000282516 S100A14Q9HCY8 104 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 LYARQ9NX58 379 aaKnown RBP8.64□□□□□ -1.03
NIPBL-201ENST00000282516 EGFL7Q9UHF1 273 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 KLF15Q9UIH9 416 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 ELOVL7A1L3X0 281 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 HYKKA2RU49 373 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 GRXCR2A6NFK2 248 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 ITGA10O75578 1167 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 GPIP06744 558 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 CD44P16070 742 aaKnown RBP8.64□□□□□ -1.03
NIPBL-201ENST00000282516 MAPK12P53778 367 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 MSANTD2Q6P1R3 559 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 GIMAP5Q96F15 307 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 MRPL45Q9BRJ2 306 aaKnown RBP8.64□□□□□ -1.03
NIPBL-201ENST00000282516 ELAC1Q9H777 363 aaKnown RBP8.64□□□□□ -1.03
NIPBL-201ENST00000282516 B3GAT2Q9NPZ5 323 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 FABP12A6NFH5 140 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 SNX3O60493 162 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 PLGP00747 810 aaPredicted RBP8.64□□□□□ -1.03
NIPBL-201ENST00000282516 GADD45AP24522 165 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 S100PP25815 95 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 DNAJA1P31689 397 aaKnown RBP8.64□□□□□ -1.03
NIPBL-201ENST00000282516 GRK6P43250 576 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 FASTKD3Q14CZ7 662 aaKnown RBP8.64□□□□□ -1.03
NIPBL-201ENST00000282516 ASTE1Q2TB18 679 aaPredicted RBP8.64□□□□□ -1.03
NIPBL-201ENST00000282516 C3orf33Q6P1S2 294 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 TMPRSS11BQ86T26 416 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 APOLD1Q96LR9 279 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 LPIN3Q9BQK8 851 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 ATG10Q9H0Y0 220 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 CCSER2Q9H7U1 834 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 KCTD5Q9NXV2 234 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 TEX13CA0A0J9YWL9 993 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 PRORSD1PA6NEY8 169 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 IL1R1P14778 569 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 VARSP26640 1264 aaKnown RBP8.64□□□□□ -1.03
NIPBL-201ENST00000282516 PSEN2P49810 448 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 AIMP2Q13155 320 aaKnown RBP8.64□□□□□ -1.03
NIPBL-201ENST00000282516 C6orf52Q5T4I8 152 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 IQSEC1Q6DN90 963 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 CIR1Q86X95 450 aaPredicted RBP8.64□□□□□ -1.03
NIPBL-201ENST00000282516 SPATA22Q8NHS9 363 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 PSKH2Q96QS6 385 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 ZNF347Q96SE7 839 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 BPIFA1Q9NP55 256 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 MRPS23Q9Y3D9 190 aaKnown RBP8.64□□□□□ -1.03
NIPBL-201ENST00000282516 SALL1Q9NSC2 1324 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 FXYD6-FXYD2A0A087WZ82 144 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 ADAMTS3O15072 1205 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 RECQL4O94761 1208 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 TUBG1P23258 451 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 AIF1P55008 147 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 GRK1Q15835 563 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 UBAP2Q5T6F2 1119 aaKnown RBP8.64□□□□□ -1.03
NIPBL-201ENST00000282516 KCNK18Q7Z418 384 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 ZMIZ2Q8NF64 920 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 CD300LFQ8TDQ1 290 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 TLR10Q9BXR5 811 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 FXYD6Q9H0Q3 95 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 ABCG8Q9H221 673 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 KAT8Q9H7Z6 458 aaKnown RBP8.64□□□□□ -1.03
NIPBL-201ENST00000282516 CNOT6Q9ULM6 557 aaKnown RBP8.64□□□□□ -1.03
NIPBL-201ENST00000282516 ERVK-11Q9UQG0 969 aa8.64□□□□□ -1.03
NIPBL-201ENST00000282516 TIMM13Q9Y5L4 95 aaPredicted RBP8.64□□□□□ -1.03
NIPBL-201ENST00000282516 APC2O95996 2303 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms