RNA–Protein interactions for RNA: ENST00000269967.3

CCDC97-201, Transcript of coiled-coil domain containing 97, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC97, Length 3,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97-201ENST00000269967 HERC3Q15034 1050 aa13.13□□□□□ -0.31
CCDC97-201ENST00000269967 C6orf136Q5SQH8 315 aa13.13□□□□□ -0.31
CCDC97-201ENST00000269967 ARTNQ5T4W7 220 aa13.13□□□□□ -0.31
CCDC97-201ENST00000269967 STK32CQ86UX6 486 aa13.13□□□□□ -0.31
CCDC97-201ENST00000269967 FIBCD1Q8N539 461 aa13.13□□□□□ -0.31
CCDC97-201ENST00000269967 LKAAEAR1Q8TD35 194 aa13.13□□□□□ -0.31
CCDC97-201ENST00000269967 MRPS31Q92665 395 aaKnown RBP13.13□□□□□ -0.31
CCDC97-201ENST00000269967 EID2BQ96D98 161 aa13.13□□□□□ -0.31
CCDC97-201ENST00000269967 VCX3AQ9NNX9 186 aa13.13□□□□□ -0.31
CCDC97-201ENST00000269967 SLCO3A1Q9UIG8 710 aa13.13□□□□□ -0.31
CCDC97-201ENST00000269967 ZNF225Q9UK10 706 aa13.13□□□□□ -0.31
CCDC97-201ENST00000269967 LSM7Q9UK45 103 aaKnown RBP13.13□□□□□ -0.31
CCDC97-201ENST00000269967 DOCK6Q96HP0 2047 aa13.13□□□□□ -0.31
CCDC97-201ENST00000269967 RALGAPA2Q2PPJ7 1873 aa13.13□□□□□ -0.31
CCDC97-201ENST00000269967 OR2AG2A6NM03 316 aa13.13□□□□□ -0.31
CCDC97-201ENST00000269967 HMGA1P17096 107 aaKnown RBP13.13□□□□□ -0.31
CCDC97-201ENST00000269967 ZXDBP98169 803 aa13.13□□□□□ -0.31
CCDC97-201ENST00000269967 PRKCQQ04759 706 aa13.13□□□□□ -0.31
CCDC97-201ENST00000269967 MRPL58Q14197 206 aaKnown RBP13.13□□□□□ -0.31
CCDC97-201ENST00000269967 CBX2Q14781 532 aaPredicted RBP13.13□□□□□ -0.31
CCDC97-201ENST00000269967 NEDD8Q15843 81 aa13.13□□□□□ -0.31
CCDC97-201ENST00000269967 FAM26DQ5JW98 314 aa13.13□□□□□ -0.31
CCDC97-201ENST00000269967 ZNF648Q5T619 568 aaPredicted RBP13.13□□□□□ -0.31
CCDC97-201ENST00000269967 CXorf57Q6NSI4 855 aaKnown RBP13.13□□□□□ -0.31
CCDC97-201ENST00000269967 RNF175Q8N4F7 328 aa13.13□□□□□ -0.31
CCDC97-201ENST00000269967 SORCS1Q8WY21 1168 aa13.13□□□□□ -0.31
CCDC97-201ENST00000269967 L3HYPDHQ96EM0 354 aa13.13□□□□□ -0.31
CCDC97-201ENST00000269967 DERL2Q9GZP9 239 aa13.13□□□□□ -0.31
CCDC97-201ENST00000269967 OPTCQ9UBM4 332 aa13.13□□□□□ -0.31
CCDC97-201ENST00000269967 TMEM189-UBE2V1I3L0A0 370 aa13.12□□□□□ -0.31
CCDC97-201ENST00000269967 IRX1P78414 480 aaPredicted RBP13.12□□□□□ -0.31
CCDC97-201ENST00000269967 GTF2H2Q13888 395 aa13.12□□□□□ -0.31
CCDC97-201ENST00000269967 FAM174BQ3ZCQ3 159 aa13.12□□□□□ -0.31
CCDC97-201ENST00000269967 SETMARQ53H47 684 aaPredicted RBP13.12□□□□□ -0.31
CCDC97-201ENST00000269967 GTF2H2CQ6P1K8 395 aa13.12□□□□□ -0.31
CCDC97-201ENST00000269967 PHACTR4Q8IZ21 702 aa13.12□□□□□ -0.31
CCDC97-201ENST00000269967 PARP8Q8N3A8 854 aa13.12□□□□□ -0.31
CCDC97-201ENST00000269967 SLC22A17Q8WUG5 538 aa13.12□□□□□ -0.31
CCDC97-201ENST00000269967 ZNF296Q8WUU4 475 aaPredicted RBP13.12□□□□□ -0.31
CCDC97-201ENST00000269967 HIC2Q96JB3 615 aa13.12□□□□□ -0.31
CCDC97-201ENST00000269967 BTBD9Q96Q07 612 aa13.12□□□□□ -0.31
CCDC97-201ENST00000269967 C2orf49Q9BVC5 232 aaPredicted RBP13.12□□□□□ -0.31
CCDC97-201ENST00000269967 BBS2Q9BXC9 721 aa13.12□□□□□ -0.31
CCDC97-201ENST00000269967 TMEM39AQ9NV64 488 aa13.12□□□□□ -0.31
CCDC97-201ENST00000269967 INTS10Q9NVR2 710 aaKnown RBP13.12□□□□□ -0.31
CCDC97-201ENST00000269967 SUCOQ9UBS9 1254 aaKnown RBP13.12□□□□□ -0.31
CCDC97-201ENST00000269967 LIMD1Q9UGP4 676 aa13.12□□□□□ -0.31
CCDC97-201ENST00000269967 PCTPQ9UKL6 214 aa13.12□□□□□ -0.31
CCDC97-201ENST00000269967 RNF11Q9Y3C5 154 aa13.12□□□□□ -0.31
CCDC97-201ENST00000269967 NYNRINQ9P2P1 1898 aaKnown RBP13.12□□□□□ -0.31
CCDC97-201ENST00000269967 PRSS51A0A1B0GVH4 220 aa13.12□□□□□ -0.31
CCDC97-201ENST00000269967 CCL16O15467 120 aa13.12□□□□□ -0.31
CCDC97-201ENST00000269967 LRG1P02750 347 aa13.12□□□□□ -0.31
CCDC97-201ENST00000269967 RPL5P46777 297 aaKnown RBP13.12□□□□□ -0.31
CCDC97-201ENST00000269967 CASP9P55211 416 aa13.12□□□□□ -0.31
CCDC97-201ENST00000269967 KRTCAP2Q8N6L1 136 aa13.12□□□□□ -0.31
CCDC97-201ENST00000269967 BEND7Q8N7W2 519 aaPredicted RBP13.12□□□□□ -0.31
CCDC97-201ENST00000269967 TMEM102Q8N9M5 508 aaPredicted RBP13.12□□□□□ -0.31
CCDC97-201ENST00000269967 OR10A6Q8NH74 314 aa13.12□□□□□ -0.31
CCDC97-201ENST00000269967 SLCO4A1Q96BD0 722 aa13.12□□□□□ -0.31
CCDC97-201ENST00000269967 RMND5BQ96G75 393 aaPredicted RBP13.12□□□□□ -0.31
CCDC97-201ENST00000269967 TRIB3Q96RU7 358 aa13.12□□□□□ -0.31
CCDC97-201ENST00000269967 ING2Q9H160 280 aa13.12□□□□□ -0.31
CCDC97-201ENST00000269967 ZNF334Q9HCZ1 680 aaPredicted RBP13.12□□□□□ -0.31
CCDC97-201ENST00000269967 MRPL17Q9NRX2 175 aaKnown RBP13.12□□□□□ -0.31
CCDC97-201ENST00000269967 VPS4AQ9UN37 437 aa13.12□□□□□ -0.31
CCDC97-201ENST00000269967 MIA3Q5JRA6 1907 aa13.12□□□□□ -0.31
CCDC97-201ENST00000269967 MYOFQ9NZM1 2061 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 NEDD8-MDP1E9PL57 170 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 RAD51BO15315 384 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 CLOCKO15516 846 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 HOXA2O43364 376 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 MLYCDO95822 493 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 UROSP10746 265 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 NR4A1P22736 598 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 CST5P28325 142 aaPredicted RBP13.11□□□□□ -0.31
CCDC97-201ENST00000269967 SLC7A1P30825 629 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 CD70P32970 193 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 HNF1BP35680 557 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 DEFB103AP81534 67 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 LAPTM4AQ15012 233 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 TRIM60Q495X7 471 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 AARS2Q5JTZ9 985 aaKnown RBP13.11□□□□□ -0.31
CCDC97-201ENST00000269967 GLYATQ6IB77 296 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 NANOGP8Q6NSW7 305 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 GOLGA7Q7Z5G4 137 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 LMNTD1Q8N9Z9 388 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 PNPT1Q8TCS8 783 aaKnown RBP13.11□□□□□ -0.31
CCDC97-201ENST00000269967 SCAMP4Q969E2 229 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 NSMCE2Q96MF7 247 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 CCDC90BQ9GZT6 254 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 NANOGQ9H9S0 305 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 ZDHHC4Q9NPG8 344 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 ASB3Q9Y575 518 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 GLYATL1P3A0A0U1RQE8 302 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 ULK1O75385 1050 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 TFAP2AP05549 437 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 XPAP23025 273 aaPredicted RBP13.11□□□□□ -0.31
CCDC97-201ENST00000269967 CSRP3P50461 194 aa13.11□□□□□ -0.31
CCDC97-201ENST00000269967 OR4D2P58180 307 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms