RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 NEMP1O14524 444 aa16.12■□□□□ 0.17
TPM1-201ENST00000267996 HDAC3O15379 428 aa16.12■□□□□ 0.17
TPM1-201ENST00000267996 GRID2O43424 1007 aa16.12■□□□□ 0.17
TPM1-201ENST00000267996 ADAM23O75077 832 aa16.12■□□□□ 0.17
TPM1-201ENST00000267996 SUPT3HO75486 399 aa16.12■□□□□ 0.17
TPM1-201ENST00000267996 ENO3P13929 434 aaPredicted RBP16.12■□□□□ 0.17
TPM1-201ENST00000267996 GFAPP14136 432 aa16.12■□□□□ 0.17
TPM1-201ENST00000267996 MSH3P20585 1137 aa16.12■□□□□ 0.17
TPM1-201ENST00000267996 CORO7P57737 925 aa16.12■□□□□ 0.17
TPM1-201ENST00000267996 NAA20P61599 178 aa16.12■□□□□ 0.17
TPM1-201ENST00000267996 PON2Q15165 354 aa16.12■□□□□ 0.17
TPM1-201ENST00000267996 PPP1R3AQ16821 1122 aa16.12■□□□□ 0.17
TPM1-201ENST00000267996 ZNF776Q68DI1 518 aaPredicted RBP16.12■□□□□ 0.17
TPM1-201ENST00000267996 MYO1HQ8N1T3 1032 aa16.12■□□□□ 0.17
TPM1-201ENST00000267996 IL17RCQ8NAC3 791 aa16.12■□□□□ 0.17
TPM1-201ENST00000267996 ACTR5Q9H9F9 607 aaPredicted RBP16.12■□□□□ 0.17
TPM1-201ENST00000267996 EML4Q9HC35 981 aaKnown RBP16.12■□□□□ 0.17
TPM1-201ENST00000267996 CD248Q9HCU0 757 aa16.12■□□□□ 0.17
TPM1-201ENST00000267996 HEBP1Q9NRV9 189 aa16.12■□□□□ 0.17
TPM1-201ENST00000267996 NUDT4Q9NZJ9 180 aa16.12■□□□□ 0.17
TPM1-201ENST00000267996 ZFP69BQ9UJL9 534 aa16.12■□□□□ 0.17
TPM1-201ENST00000267996 HGSO14964 777 aaPredicted RBP16.11■□□□□ 0.17
TPM1-201ENST00000267996 TSPAN6O43657 245 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 LZTS3O60299 673 aaPredicted RBP16.11■□□□□ 0.17
TPM1-201ENST00000267996 MTX2O75431 263 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 GLULP15104 373 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 SCTRP47872 440 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 ALDH18A1P54886 795 aaKnown RBP16.11■□□□□ 0.17
TPM1-201ENST00000267996 MRPS21P82921 87 aaKnown RBP16.11■□□□□ 0.17
TPM1-201ENST00000267996 ZBTB16Q05516 673 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 TGFBIQ15582 683 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 PLEKHS1Q5SXH7 462 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 KIAA1211LQ6NV74 962 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 ALYREFQ86V81 257 aaKnown RBP16.11■□□□□ 0.17
TPM1-201ENST00000267996 PELI3Q8N2H9 469 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 MAPK15Q8TD08 544 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 CXorf40AQ8TE69 158 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 ERLEC1Q96DZ1 483 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 ASB2Q96Q27 587 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 COG4Q9H9E3 785 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 APOBEC2Q9Y235 224 aaKnown RBP16.11■□□□□ 0.17
TPM1-201ENST00000267996 ATG2BQ96BY7 2078 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 A0A1W2PQF6 199 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 FCHO1O14526 889 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 KPNA5O15131 536 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 NUAK1O60285 661 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 SUPT7LO94864 414 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 SIX3O95343 332 aaPredicted RBP16.11■□□□□ 0.17
TPM1-201ENST00000267996 RPS17P08708 135 aaKnown RBP16.11■□□□□ 0.17
TPM1-201ENST00000267996 GRSF1Q12849 480 aaKnown RBP eCLIP16.11■□□□□ 0.17
TPM1-201ENST00000267996 SEL1L3Q68CR1 1132 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 SDE2Q6IQ49 451 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 RPS27LQ71UM5 84 aaKnown RBP16.11■□□□□ 0.17
TPM1-201ENST00000267996 DET1Q7L5Y6 550 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 TRMT11Q7Z4G4 463 aaKnown RBP16.11■□□□□ 0.17
TPM1-201ENST00000267996 PHYKPLQ8IUZ5 450 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 KIRREL3Q8IZU9 778 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 HDDC3Q8N4P3 179 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 RASGEF1AQ8N9B8 481 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 FAM126AQ9BYI3 521 aaPredicted RBP16.11■□□□□ 0.17
TPM1-201ENST00000267996 EPHX3Q9H6B9 360 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 SAR1AQ9NR31 198 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 OARD1Q9Y530 152 aa16.11■□□□□ 0.17
TPM1-201ENST00000267996 MYO10Q9HD67 2058 aa16.1■□□□□ 0.17
TPM1-201ENST00000267996 LRRC14BA6NHZ5 514 aa16.1■□□□□ 0.17
TPM1-201ENST00000267996 SHISA7A6NL88 538 aa16.1■□□□□ 0.17
TPM1-201ENST00000267996 K7ESM1 405 aa16.1■□□□□ 0.17
TPM1-201ENST00000267996 UBFD1O14562 309 aaKnown RBP16.1■□□□□ 0.17
TPM1-201ENST00000267996 CCDC22O60826 627 aa16.1■□□□□ 0.17
TPM1-201ENST00000267996 TMEM115Q12893 351 aaPredicted RBP16.1■□□□□ 0.17
TPM1-201ENST00000267996 STARD3Q14849 445 aa16.1■□□□□ 0.17
TPM1-201ENST00000267996 AGERQ15109 404 aa16.1■□□□□ 0.17
TPM1-201ENST00000267996 ZNF648Q5T619 568 aaPredicted RBP16.1■□□□□ 0.17
TPM1-201ENST00000267996 IER5LQ5T953 404 aa16.1■□□□□ 0.17
TPM1-201ENST00000267996 VWA5B1Q5TIE3 1220 aa16.1■□□□□ 0.17
TPM1-201ENST00000267996 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.1■□□□□ 0.17
TPM1-201ENST00000267996 CUZD1Q86UP6 607 aa16.1■□□□□ 0.17
TPM1-201ENST00000267996 PDPRQ8NCN5 879 aa16.1■□□□□ 0.17
TPM1-201ENST00000267996 MSANTD3Q96H12 275 aa16.1■□□□□ 0.17
TPM1-201ENST00000267996 LRCH3Q96II8 777 aa16.1■□□□□ 0.17
TPM1-201ENST00000267996 FAR2Q96K12 515 aa16.1■□□□□ 0.17
TPM1-201ENST00000267996 SHCBP1LQ9BZQ2 653 aa16.1■□□□□ 0.17
TPM1-201ENST00000267996 NMUR2Q9GZQ4 415 aa16.1■□□□□ 0.17
TPM1-201ENST00000267996 MKRN2Q9H000 416 aaKnown RBP16.1■□□□□ 0.17
TPM1-201ENST00000267996 RDH14Q9HBH5 336 aa16.1■□□□□ 0.17
TPM1-201ENST00000267996 TNFRSF12AQ9NP84 129 aa16.1■□□□□ 0.17
TPM1-201ENST00000267996 SERGEFQ9UGK8 458 aa16.1■□□□□ 0.17
TPM1-201ENST00000267996 GPC4O75487 556 aa16.09■□□□□ 0.17
TPM1-201ENST00000267996 KLF8O95600 359 aaPredicted RBP16.09■□□□□ 0.17
TPM1-201ENST00000267996 FTH1P02794 183 aa16.09■□□□□ 0.17
TPM1-201ENST00000267996 SERPINA6P08185 405 aa16.09■□□□□ 0.17
TPM1-201ENST00000267996 MPC1LP0DKB6 136 aa16.09■□□□□ 0.17
TPM1-201ENST00000267996 T-ENOLP0DO92 83 aa16.09■□□□□ 0.17
TPM1-201ENST00000267996 EEF1DP29692 281 aaKnown RBP16.09■□□□□ 0.17
TPM1-201ENST00000267996 PRLHRP49683 370 aa16.09■□□□□ 0.17
TPM1-201ENST00000267996 ACTN3Q08043 901 aaPredicted RBP16.09■□□□□ 0.17
TPM1-201ENST00000267996 KRT72Q14CN4 511 aa16.09■□□□□ 0.17
TPM1-201ENST00000267996 SMAD2Q15796 467 aaKnown RBP16.09■□□□□ 0.17
TPM1-201ENST00000267996 CCDC85BQ15834 202 aaPredicted RBP16.09■□□□□ 0.17
TPM1-201ENST00000267996 SH2D4BQ5SQS7 431 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms