RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 AUTS2Q8WXX7 1259 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 EID2BQ96D98 161 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 TRMT2BQ96GJ1 504 aaKnown RBP12.74□□□□□ -0.37
CPSF6-201ENST00000266679 UHRF1Q96T88 793 aaPredicted RBP12.74□□□□□ -0.37
CPSF6-201ENST00000266679 SLC29A1Q99808 456 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 SEZ6LQ9BYH1 1024 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 ZNF334Q9HCZ1 680 aaPredicted RBP12.74□□□□□ -0.37
CPSF6-201ENST00000266679 SLC52A3Q9NQ40 469 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 TMCO1Q9UM00 188 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 COL4A6Q14031 1691 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 TYW5A2RUC4 315 aaKnown RBP12.73□□□□□ -0.37
CPSF6-201ENST00000266679 FZD6O60353 706 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 UGT1A6P19224 532 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 SOX11P35716 441 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 ERVPABLB-1P60509 514 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 TGFBIQ15582 683 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 TIGD2Q4W5G0 525 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 TBCELQ5QJ74 424 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 PTRHD1Q6GMV3 140 aaKnown RBP12.73□□□□□ -0.37
CPSF6-201ENST00000266679 LETMD1Q6P1Q0 360 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 TMEM150AQ86TG1 271 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 IFNEQ86WN2 208 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 CHERPQ8IWX8 916 aaKnown RBP12.73□□□□□ -0.37
CPSF6-201ENST00000266679 MYO1HQ8N1T3 1032 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 STK40Q8N2I9 435 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 ARL14EPQ8N8R7 260 aaPredicted RBP12.73□□□□□ -0.37
CPSF6-201ENST00000266679 FNDC5Q8NAU1 212 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 DNAJB14Q8TBM8 379 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 LKAAEAR1Q8TD35 194 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 ZUFSPQ96AP4 578 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 TMEM125Q96AQ2 219 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 ZNF597Q96LX8 424 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 PRPF18Q99633 342 aaKnown RBP12.73□□□□□ -0.37
CPSF6-201ENST00000266679 BOCQ9BWV1 1114 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 MRPS26Q9BYN8 205 aaKnown RBP12.73□□□□□ -0.37
CPSF6-201ENST00000266679 ZNF696Q9H7X3 374 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 EVLQ9UI08 416 aaPredicted RBP12.73□□□□□ -0.37
CPSF6-201ENST00000266679 OR51B4Q9Y5P0 310 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 ZNF106Q9H2Y7 1883 aaKnown RBP12.73□□□□□ -0.37
CPSF6-201ENST00000266679 A0A1W2PP18 115 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 DHRS12A0PJE2 317 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 CCDC154A6NI56 674 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 ARPC2O15144 300 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 TPST1O60507 370 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 SLC22A3O75751 556 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 CLPTM1O96005 669 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 SOD2P04179 222 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 S100BP04271 92 aaPredicted RBP12.73□□□□□ -0.37
CPSF6-201ENST00000266679 HSD17B1P14061 328 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 CKMT2P17540 419 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 CD9P21926 228 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 GKP32189 559 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 ZFP36L2P47974 494 aaKnown RBP12.73□□□□□ -0.37
CPSF6-201ENST00000266679 HTR6P50406 440 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 NAA20P61599 178 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 ERVK-8P63133 956 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 FOXM1Q08050 763 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 BNIP2Q12982 314 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 RCAN2Q14206 197 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 INPP5AQ14642 412 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 FUT11Q495W5 492 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 INO80DQ53TQ3 878 aaPredicted RBP12.73□□□□□ -0.37
CPSF6-201ENST00000266679 RABL3Q5HYI8 236 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 PAGE3Q5JUK9 113 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 TPGS2Q68CL5 300 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 CWF19L1Q69YN2 538 aaKnown RBP12.73□□□□□ -0.37
CPSF6-201ENST00000266679 TXNDC8Q6A555 127 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 ERMP1Q7Z2K6 904 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 DNAJB7Q7Z6W7 309 aaPredicted RBP12.73□□□□□ -0.37
CPSF6-201ENST00000266679 SERPINA9Q86WD7 417 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 APCDD1Q8J025 514 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 ADAMTS19Q8TE59 1207 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 ZNF382Q96SR6 550 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 HBEGFQ99075 208 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 GRIP2Q9C0E4 1043 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 RIC8BQ9NVN3 520 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 DHRS7Q9Y394 339 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 PCDHA9Q9Y5H5 950 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 CPQQ9Y646 472 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 SLC4A7Q9Y6M7 1214 aa12.73□□□□□ -0.37
CPSF6-201ENST00000266679 A0A1B0GTW7 788 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 SOCS2O14508 198 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 PRMT5O14744 637 aaPredicted RBP12.72□□□□□ -0.37
CPSF6-201ENST00000266679 SMAD6O43541 496 aaKnown RBP12.72□□□□□ -0.37
CPSF6-201ENST00000266679 SYNCRIPO60506 623 aaKnown RBP12.72□□□□□ -0.37
CPSF6-201ENST00000266679 PGLSO95336 258 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 PRAMEF1O95521 474 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 MTHFD1P11586 935 aaKnown RBP12.72□□□□□ -0.37
CPSF6-201ENST00000266679 NELFEP18615 380 aaKnown RBP12.72□□□□□ -0.37
CPSF6-201ENST00000266679 IL12AP29459 219 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 ZXDBP98169 803 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 ROR2Q01974 943 aaKnown RBP12.72□□□□□ -0.37
CPSF6-201ENST00000266679 PDCD4Q53EL6 469 aaKnown RBP12.72□□□□□ -0.37
CPSF6-201ENST00000266679 COQ5Q5HYK3 327 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 FAM117BQ6P1L5 589 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 GOLGA7Q7Z5G4 137 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 ANKFN1Q8N957 763 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 PIH1D2Q8WWB5 315 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 TRIM54Q9BYV2 358 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 BRINP2Q9C0B6 783 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms