RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 CYB5D2Q8WUJ1 264 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 RAD51AP1Q96B01 352 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 NEMP2A6NFY4 417 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 CCNDBP1O95273 360 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 GHRHRQ02643 423 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 ARSIQ5FYB1 569 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 SIRPB2Q5JXA9 342 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 CDC73Q6P1J9 531 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 FAM192AQ9GZU8 254 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 C3orf14Q9HBI5 128 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 CCDC177Q9NQR7 707 aaPredicted RBP15.24■□□□□ 0.03
TIMP3-201ENST00000266085 ADGRE2Q9UHX3 823 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 GNEQ9Y223 722 aaKnown RBP15.24■□□□□ 0.03
TIMP3-201ENST00000266085 CXorf49A8MYA2 514 aaPredicted RBP15.24■□□□□ 0.03
TIMP3-201ENST00000266085 FOXN2P32314 431 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 TOP3AQ13472 1001 aaPredicted RBP15.24■□□□□ 0.03
TIMP3-201ENST00000266085 TCEAL1Q15170 157 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 TEAD2Q15562 447 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 TIMM50Q3ZCQ8 353 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 CCNYL2Q5T2Q4 361 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 MACC1Q6ZN28 852 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 LYSMD3Q7Z3D4 306 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 SNX20Q7Z614 316 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 C14orf80Q86SX3 495 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 TSPAN14Q8NG11 270 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 MIEF2Q96C03 454 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 OSBPL11Q9BXB4 747 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 OSBPL7Q9BZF2 842 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 NIPSNAP2O75323 286 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 C8GP07360 202 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 ZNF33AQ06730 810 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 RALGDSQ12967 914 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 GLYATQ6IB77 296 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 GDPD4Q6W3E5 623 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 ARMC8Q8IUR7 673 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.24■□□□□ 0.03
TIMP3-201ENST00000266085 CLPTM1LQ96KA5 538 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 CDH22Q9UJ99 828 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 RAB23Q9ULC3 237 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 LYVE1Q9Y5Y7 322 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 AP3D1O14617 1153 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 ANXA4P09525 319 aaPredicted RBP15.23■□□□□ 0.03
TIMP3-201ENST00000266085 GRSF1Q12849 480 aaKnown RBP eCLIP15.23■□□□□ 0.03
TIMP3-201ENST00000266085 IRF5Q13568 498 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 DGKKQ5KSL6 1271 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 C9orf64Q5T6V5 341 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 PAQR3Q6TCH7 311 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 HDDC3Q8N4P3 179 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 ST13P5Q8NFI4 369 aaPredicted RBP15.23■□□□□ 0.03
TIMP3-201ENST00000266085 EVA1BQ9NVM1 165 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 DDX18Q9NVP1 670 aaKnown RBP15.23■□□□□ 0.03
TIMP3-201ENST00000266085 CYTH4Q9UIA0 394 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 SAMD4AQ9UPU9 718 aaKnown RBP15.23■□□□□ 0.03
TIMP3-201ENST00000266085 TEX264Q9Y6I9 313 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 PIPSLA2A3N6 862 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 TRIM24O15164 1050 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 MED26O95402 600 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 NRIP1P48552 1158 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 RFTN2Q52LD8 501 aaPredicted RBP15.23■□□□□ 0.03
TIMP3-201ENST00000266085 MMAAQ8IVH4 418 aaKnown RBP15.23■□□□□ 0.03
TIMP3-201ENST00000266085 CELF5Q8N6W0 485 aaKnown RBP15.23■□□□□ 0.03
TIMP3-201ENST00000266085 OR4A15Q8NGL6 344 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 BPIFB1Q8TDL5 484 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 SMG9Q9H0W8 520 aaKnown RBP15.23■□□□□ 0.03
TIMP3-201ENST00000266085 ADAM30Q9UKF2 790 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 MRPS17Q9Y2R5 130 aaKnown RBP15.23■□□□□ 0.03
TIMP3-201ENST00000266085 POLR1DQ9Y2S0 133 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 C9JVG2 144 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 F7P08709 466 aaPredicted RBP15.23■□□□□ 0.03
TIMP3-201ENST00000266085 ADH5P11766 374 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 PCSK2P16519 638 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 PROZP22891 400 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 MSS51Q4VC12 460 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 LY6G5CQ5SRR4 150 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 CEP68Q76N32 757 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 OR52L1Q8NGH7 329 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 DCAKDQ8WVC6 231 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 RAD9AQ99638 391 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 MCMBPQ9BTE3 642 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 FLRT1Q9NZU1 646 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 AP4B1Q9Y6B7 739 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 FAM159BA6NKW6 160 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 ANKRD66B4E2M5 251 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 OR10H3O60404 316 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 WFS1O76024 890 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 GNAZP19086 355 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 MAGEA10P43363 369 aaPredicted RBP15.23■□□□□ 0.03
TIMP3-201ENST00000266085 CCNHP51946 323 aaPredicted RBP15.23■□□□□ 0.03
TIMP3-201ENST00000266085 RIPK1Q13546 671 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 SNAP47Q5SQN1 464 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 MED27Q6P2C8 311 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 DEPDC4Q8N2C3 294 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 KLHL23Q8NBE8 558 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 TTLL2Q9BWV7 592 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 OR2AG1Q9H205 316 aa15.23■□□□□ 0.03
TIMP3-201ENST00000266085 TFB2MQ9H5Q4 396 aaKnown RBP15.23■□□□□ 0.03
TIMP3-201ENST00000266085 RGS17Q9UGC6 210 aaPredicted RBP15.23■□□□□ 0.03
TIMP3-201ENST00000266085 MYH3P11055 1940 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 MYH10P35580 1976 aa15.22■□□□□ 0.03
TIMP3-201ENST00000266085 MBLAC1A4D2B0 266 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms