RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 USP1O94782 785 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 PAK4O96013 591 aaPredicted RBP13.19□□□□□ -0.3
SGCA-201ENST00000262018 POLBP06746 335 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 MMP2P08253 660 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 CD97P48960 835 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 WNT3AP56704 352 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 GNGT1P63211 74 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 EIF2B5Q13144 721 aaKnown RBP13.19□□□□□ -0.3
SGCA-201ENST00000262018 NAB1Q13506 487 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 RFTN1Q14699 578 aaPredicted RBP13.19□□□□□ -0.3
SGCA-201ENST00000262018 CRYMQ14894 314 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 SLC14A2Q15849 920 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 TMEM259Q4ZIN3 620 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 FHL5Q5TD97 284 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 ARMC3Q5W041 872 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 ALG1LQ6GMV1 187 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 TRMT10BQ6PF06 316 aaKnown RBP13.19□□□□□ -0.3
SGCA-201ENST00000262018 RANBP10Q6VN20 620 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 TMEM135Q86UB9 458 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 SLC26A11Q86WA9 606 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 LRRC6Q86X45 466 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 IPMKQ8NFU5 416 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 CENPTQ96BT3 561 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 SELENOSQ9BQE4 189 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 APOL2Q9BQE5 337 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 TRIM56Q9BRZ2 755 aaKnown RBP13.19□□□□□ -0.3
SGCA-201ENST00000262018 SLC17A9Q9BYT1 436 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 ARNT2Q9HBZ2 717 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 SMYD2Q9NRG4 433 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 HAUS2Q9NVX0 235 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 SIRPGQ9P1W8 387 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 UBA2Q9UBT2 640 aaPredicted RBP13.19□□□□□ -0.3
SGCA-201ENST00000262018 APOBEC3BQ9UH17 382 aaKnown RBP13.19□□□□□ -0.3
SGCA-201ENST00000262018 SOX13Q9UN79 622 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 FBN2P35556 2912 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 SCN8AQ9UQD0 1980 aa13.18□□□□□ -0.3
SGCA-201ENST00000262018 IQANK1A0A1B0GTG1 560 aa13.18□□□□□ -0.3
SGCA-201ENST00000262018 A0A1W2PQM1 296 aa13.18□□□□□ -0.3
SGCA-201ENST00000262018 CXorf49A8MYA2 514 aaPredicted RBP13.18□□□□□ -0.3
SGCA-201ENST00000262018 C9orf172C9J069 976 aa13.18□□□□□ -0.3
SGCA-201ENST00000262018 LMO7DNF2Z398 122 aa13.18□□□□□ -0.3
SGCA-201ENST00000262018 YY2O15391 372 aa13.18□□□□□ -0.3
SGCA-201ENST00000262018 PMPCBO75439 489 aa13.18□□□□□ -0.3
SGCA-201ENST00000262018 CTSLP07711 333 aa13.18□□□□□ -0.3
SGCA-201ENST00000262018 INHBAP08476 426 aa13.18□□□□□ -0.3
SGCA-201ENST00000262018 CREB1P16220 341 aa13.18□□□□□ -0.3
SGCA-201ENST00000262018 CD82P27701 267 aa13.18□□□□□ -0.3
SGCA-201ENST00000262018 UQCRFS1P47985 274 aa13.18□□□□□ -0.3
SGCA-201ENST00000262018 SERPINH1P50454 418 aaKnown RBP13.18□□□□□ -0.3
SGCA-201ENST00000262018 MAXP61244 160 aa13.18□□□□□ -0.3
SGCA-201ENST00000262018 ARF5P84085 180 aa13.18□□□□□ -0.3
SGCA-201ENST00000262018 DSC2Q02487 901 aa13.18□□□□□ -0.3
SGCA-201ENST00000262018 ITKQ08881 620 aa13.18□□□□□ -0.3
SGCA-201ENST00000262018 FGL2Q14314 439 aa13.18□□□□□ -0.3
SGCA-201ENST00000262018 ZNF235Q14590 738 aa13.18□□□□□ -0.3
SGCA-201ENST00000262018 CERCAMQ5T4B2 595 aa13.18□□□□□ -0.3
SGCA-201ENST00000262018 SRRM1Q8IYB3 904 aaKnown RBP13.18□□□□□ -0.3
SGCA-201ENST00000262018 BBS5Q8N3I7 341 aa13.18□□□□□ -0.3
SGCA-201ENST00000262018 PPM1NQ8N819 430 aa13.18□□□□□ -0.3
SGCA-201ENST00000262018 SSC4DQ8WTU2 575 aa13.18□□□□□ -0.3
SGCA-201ENST00000262018 MRRFQ96E11 262 aaKnown RBP13.18□□□□□ -0.3
SGCA-201ENST00000262018 KIFC1Q9BW19 673 aa13.18□□□□□ -0.3
SGCA-201ENST00000262018 POLR1EQ9GZS1 481 aaKnown RBP13.18□□□□□ -0.3
SGCA-201ENST00000262018 IKBKGQ9Y6K9 419 aa13.18□□□□□ -0.3
SGCA-201ENST00000262018 FAM169AQ9Y6X4 670 aa13.18□□□□□ -0.3
SGCA-201ENST00000262018 FOXO6A8MYZ6 492 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 FPGTO14772 594 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 PIAS1O75925 651 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 FAM155BO75949 473 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 SRCP12931 536 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 BRAFP15056 766 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 CHN1P15882 459 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 KRT15P19012 456 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 CD86P42081 329 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 MLLT10P55197 1068 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 GUCY1A3Q02108 690 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 MGAT5Q09328 741 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 IHHQ14623 411 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 ANKRD20A4Q4UJ75 823 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 PCID2Q5JVF3 399 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 LINGO4Q6UY18 593 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 ERN2Q76MJ5 926 aaKnown RBP13.17□□□□□ -0.3
SGCA-201ENST00000262018 MARK2Q7KZI7 788 aaKnown RBP13.17□□□□□ -0.3
SGCA-201ENST00000262018 CTAGE3PQ8IX95 158 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 PHACTR4Q8IZ21 702 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.17□□□□□ -0.3
SGCA-201ENST00000262018 KYQ8NBH2 561 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 PTCD2Q8WV60 388 aaKnown RBP13.17□□□□□ -0.3
SGCA-201ENST00000262018 PSKH2Q96QS6 385 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 MGME1Q9BQP7 344 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 LRRC61Q9BV99 259 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 FSD1LQ9BXM9 530 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 CEP44Q9C0F1 390 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 LRRN3Q9H3W5 708 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 TRABDQ9H4I3 376 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 MRM3Q9HC36 420 aaKnown RBP13.17□□□□□ -0.3
SGCA-201ENST00000262018 SSU72Q9NP77 194 aaKnown RBP13.17□□□□□ -0.3
SGCA-201ENST00000262018 DOLKQ9UPQ8 538 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 RPS6KL1Q9Y6S9 549 aa13.17□□□□□ -0.3
SGCA-201ENST00000262018 LRBAP50851 2863 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms