RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 ILVBLA1L0T0 632 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 KRBA1A5PL33 1030 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 NDUFS3O75489 264 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 RHOCP08134 193 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 LCP2Q13094 533 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 KIF19Q2TAC6 998 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 PITRM1Q5JRX3 1037 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 ABRAXAS1Q6UWZ7 409 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 NPAS4Q8IUM7 802 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 FBXO39Q8N4B4 442 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 LPCAT1Q8NF37 534 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 LRCH3Q96II8 777 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 CCDC138Q96M89 665 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 TUBA1CQ9BQE3 449 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 MAP10Q9P2G4 905 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 LRFN2Q9ULH4 789 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 BTRCQ9Y297 605 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 ANKRD36A6QL64 1941 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 BCL10O95999 233 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 ATP6V0D1P61421 351 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 DEPDC1Q5TB30 811 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 DDIASQ8IXT1 998 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 OR2T34Q8NGX1 318 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 OR2T3Q8NH03 318 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 STARD8Q92502 1023 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 WBP2Q969T9 261 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 FUBP1Q96AE4 644 aaKnown RBP22.33■■□□□ 1.17
MCF2L-201ENST00000261963 POLG2Q9UHN1 485 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 RAI2Q9Y5P3 530 aa22.33■■□□□ 1.17
MCF2L-201ENST00000261963 C2orf81A6NN90 581 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 TBKBP1A7MCY6 615 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 CBX4O00257 560 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 NR5A2O00482 541 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 STC2O76061 302 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 RPS17P08708 135 aaKnown RBP22.32■■□□□ 1.16
MCF2L-201ENST00000261963 CAPN3P20807 821 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 CORO1AP31146 461 aaKnown RBP22.32■■□□□ 1.16
MCF2L-201ENST00000261963 RAD51Q06609 339 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 PTPRRQ15256 657 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 PTPRNQ16849 979 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 HECTD3Q5T447 861 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 SLC8B1Q6J4K2 584 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 PSAPL1Q6NUJ1 521 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 PCYOX1LQ8NBM8 494 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 CYGBQ8WWM9 190 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 ROPN1LQ96C74 230 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 TMEM175Q9BSA9 504 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 SEMA4BQ9NPR2 832 aaPredicted RBP22.32■■□□□ 1.16
MCF2L-201ENST00000261963 RNF103-CHMP3A0A140T963 221 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 NPEPPSL1A6NEC2 478 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 C9JVG2 144 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 CLOCKO15516 846 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 AQP9O43315 295 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 OR1I1O60431 355 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 TSPAN12O95859 305 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 LINC00032P0C843 101 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 HMGA1P17096 107 aaKnown RBP22.32■■□□□ 1.16
MCF2L-201ENST00000261963 GRIA3P42263 894 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 ECT2LQ008S8 904 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 NEDD8Q15843 81 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 IGFN1Q86VF2 1251 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 PDPRQ8NCN5 879 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 CD320Q9NPF0 282 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 SCHIP1Q9P0W5 487 aaPredicted RBP22.32■■□□□ 1.16
MCF2L-201ENST00000261963 FKBPLQ9UIM3 349 aa22.32■■□□□ 1.16
MCF2L-201ENST00000261963 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.31■■□□□ 1.16
MCF2L-201ENST00000261963 BBIP1A8MTZ0 92 aa22.31■■□□□ 1.16
MCF2L-201ENST00000261963 TSPAN3O60637 253 aa22.31■■□□□ 1.16
MCF2L-201ENST00000261963 CD160O95971 181 aa22.31■■□□□ 1.16
MCF2L-201ENST00000261963 OR1D2P34982 312 aa22.31■■□□□ 1.16
MCF2L-201ENST00000261963 TMBIM6P55061 237 aa22.31■■□□□ 1.16
MCF2L-201ENST00000261963 ZNF177Q13360 481 aaPredicted RBP22.31■■□□□ 1.16
MCF2L-201ENST00000261963 VPS26BQ4G0F5 336 aa22.31■■□□□ 1.16
MCF2L-201ENST00000261963 MIER2Q8N344 545 aa22.31■■□□□ 1.16
MCF2L-201ENST00000261963 SEPT8Q92599 483 aa22.31■■□□□ 1.16
MCF2L-201ENST00000261963 SDR39U1Q9NRG7 319 aaPredicted RBP22.31■■□□□ 1.16
MCF2L-201ENST00000261963 DAPK2Q9UIK4 370 aa22.31■■□□□ 1.16
MCF2L-201ENST00000261963 LPOP22079 712 aaPredicted RBP22.31■■□□□ 1.16
MCF2L-201ENST00000261963 S100A1P23297 94 aa22.31■■□□□ 1.16
MCF2L-201ENST00000261963 TBCELQ5QJ74 424 aa22.31■■□□□ 1.16
MCF2L-201ENST00000261963 CXorf57Q6NSI4 855 aaKnown RBP22.31■■□□□ 1.16
MCF2L-201ENST00000261963 CD99L2Q8TCZ2 262 aa22.31■■□□□ 1.16
MCF2L-201ENST00000261963 PLD4Q96BZ4 506 aa22.31■■□□□ 1.16
MCF2L-201ENST00000261963 TUBGCP3Q96CW5 907 aa22.31■■□□□ 1.16
MCF2L-201ENST00000261963 CYP2S1Q96SQ9 504 aa22.31■■□□□ 1.16
MCF2L-201ENST00000261963 C9orf16Q9BUW7 83 aa22.31■■□□□ 1.16
MCF2L-201ENST00000261963 MTRRQ9UBK8 725 aa22.31■■□□□ 1.16
MCF2L-201ENST00000261963 A0A0U1RQS6 177 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.3■■□□□ 1.16
MCF2L-201ENST00000261963 KDM1AO60341 852 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 CLPXO76031 633 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 LBPP18428 481 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 PRDX3P30048 256 aaKnown RBP22.3■■□□□ 1.16
MCF2L-201ENST00000261963 AGTR2P50052 363 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 ARF5P84085 180 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 CTSL3PQ5NE16 218 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 ANKS6Q68DC2 871 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 THOC7Q6I9Y2 204 aaKnown RBP22.3■■□□□ 1.16
MCF2L-201ENST00000261963 FRA10AC1Q70Z53 315 aa22.3■■□□□ 1.16
MCF2L-201ENST00000261963 CHST9Q7L1S5 443 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms