RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 SLC14A2Q15849 920 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 ANKRD34AQ69YU3 496 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 ELMSAN1Q6PJG2 1045 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 LRRC49Q8IUZ0 686 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 KLHDC8BQ8IXV7 354 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 TBC1D21Q8IYX1 336 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 LGI2Q8N0V4 545 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 BRSK1Q8TDC3 778 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 STON2Q8WXE9 905 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 BHMTQ93088 406 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 ASB2Q96Q27 587 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 CIDEBQ9UHD4 219 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 LEF1Q9UJU2 399 aaPredicted RBP14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 TSC2P49815 1807 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 ASPDHA6ND91 283 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 ATP6V1G1O75348 118 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 POLR2IP36954 125 aaKnown RBP14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 KCNQ1P51787 676 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 TAF10Q12962 218 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 AASDHQ4L235 1098 aaPredicted RBP14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 ZNF554Q86TJ5 538 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 ITIH5Q86UX2 942 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 GPSM1Q86YR5 675 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 ITFG1Q8TB96 612 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 GFM2Q969S9 779 aaKnown RBP14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 LINGO1Q96FE5 620 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 TRMT6Q9UJA5 497 aaKnown RBP14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 TLR6Q9Y2C9 796 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 GOLGA4Q13439 2230 aaKnown RBP14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 KANSL1LA0AUZ9 987 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 SNAP91O60641 907 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 FCGR1AP12314 374 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 PRKACGP22612 351 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 HTR6P50406 440 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 TNK2Q07912 1038 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 PRKG2Q13237 762 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 ITGADQ13349 1161 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 MILR1Q7Z6M3 343 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 PIANPQ8IYJ0 282 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 DDHD1Q8NEL9 900 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 GIPC2Q8TF65 315 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 AUTS2Q8WXX7 1259 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 TMBIM1Q969X1 311 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 KIAA1191Q96A73 305 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 DUS3LQ96G46 650 aaKnown RBP14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 SEZ6LQ9BYH1 1024 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 TFB2MQ9H5Q4 396 aaKnown RBP14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 C11orf49Q9H6J7 331 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 LIMD1Q9UGP4 676 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 ZNF225Q9UK10 706 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 MIA3Q5JRA6 1907 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 SH3PXD2BA1X283 911 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 KERAO60938 352 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 MATN1P21941 496 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 SLC44A4Q53GD3 710 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 C6orf136Q5SQH8 315 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 GRAMD4Q6IC98 578 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 GPRIN3Q6ZVF9 776 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 FRA10AC1Q70Z53 315 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 BBS5Q8N3I7 341 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 PACRGLQ8N7B6 248 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 NCLNQ969V3 563 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 FUBP1Q96AE4 644 aaKnown RBP14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 BIRC8Q96P09 236 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 TRIM54Q9BYV2 358 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 ZFP14Q9HCL3 533 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 CBX4O00257 560 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 E2F6O75461 281 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 FGF1P05230 155 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 CAPN1P07384 714 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 G6PDP11413 515 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 TPP2P29144 1249 aaPredicted RBP14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 RGRP47804 291 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 CREB5Q02930 508 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 CHRNB3Q05901 458 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 EIF4EBP2Q13542 120 aaPredicted RBP14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 C7orf61Q8IZ16 206 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 SMYD1Q8NB12 490 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 CLHC1Q8NHS4 586 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 SDCCAG3Q96C92 435 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 TMEM165Q9HC07 324 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 ATP13A1Q9HD20 1204 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 FKBPLQ9UIM3 349 aa14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 POLR3HQ9Y535 204 aaPredicted RBP14.3□□□□□ -0.12
SFSWAP-201ENST00000261674 LOC285095A0A1B0GVY8 99 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 SLC2A4P14672 509 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 TCF3P15923 654 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 LSM3P62310 102 aaKnown RBP14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 AFMIDQ63HM1 303 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 PSAPL1Q6NUJ1 521 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 CD300LGQ6UXG3 332 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 TMEM199Q8N511 208 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 OR56A4Q8NGH8 313 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 ZBED2Q9BTP6 218 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 APOL5Q9BWW9 433 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 CCSER2Q9H7U1 834 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 AIG1Q9NVV5 245 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 TMEM248Q9NWD8 314 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms