RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 PIM3Q86V86 326 aa15.56■□□□□ 0.08
CCDC90B-201ENST00000260054 LRRTM4Q86VH4 590 aa15.56■□□□□ 0.08
CCDC90B-201ENST00000260054 MZB1Q8WU39 189 aa15.56■□□□□ 0.08
CCDC90B-201ENST00000260054 VIPAS39Q9H9C1 493 aa15.56■□□□□ 0.08
CCDC90B-201ENST00000260054 GULP1Q9UBP9 304 aa15.56■□□□□ 0.08
CCDC90B-201ENST00000260054 SMG5Q9UPR3 1016 aaKnown RBP15.56■□□□□ 0.08
CCDC90B-201ENST00000260054 ANKRD6Q9Y2G4 727 aa15.56■□□□□ 0.08
CCDC90B-201ENST00000260054 COMMD10Q9Y6G5 202 aa15.56■□□□□ 0.08
CCDC90B-201ENST00000260054 TRIM49D1C9J1S8 452 aa15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 AGPSO00116 658 aa15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 POP7O75817 140 aaKnown RBP15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 KRT37O76014 449 aa15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 EPN2O95208 641 aa15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 ALDOAP04075 364 aaKnown RBP15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 CHRM3P20309 590 aa15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 FDXRP22570 491 aa15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 CNTFP26441 200 aa15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 POU4F1Q01851 419 aa15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 PPARDQ03181 441 aa15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 ILF2Q12905 390 aaKnown RBP15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 NAPRTQ6XQN6 538 aa15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 CMC1Q7Z7K0 106 aa15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 GALNT13Q8IUC8 556 aa15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 HID1Q8IV36 788 aa15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 CEP97Q8IW35 865 aa15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 RIBC1Q8N443 379 aaPredicted RBP15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 GIMAP7Q8NHV1 300 aa15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 SKA1Q96BD8 255 aa15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 LOXL4Q96JB6 756 aa15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 LINC00615Q96LM1 132 aaPredicted RBP15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 PANX3Q96QZ0 392 aa15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 GPR21Q99679 349 aa15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 SLC30A3Q99726 388 aa15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 TCEAL2Q9H3H9 227 aaPredicted RBP15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 SARS2Q9NP81 518 aaKnown RBP15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 SLC23A2Q9UGH3 650 aa15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 LGALS13Q9UHV8 139 aa15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 RAB23Q9ULC3 237 aa15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 DGKBQ9Y6T7 804 aa15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 CACNA1EQ15878 2313 aa15.55■□□□□ 0.08
CCDC90B-201ENST00000260054 DNAH14Q0VDD8 3507 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 IQANK1A0A1B0GTG1 560 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 FOXO6A8MYZ6 492 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 PATE3B3GLJ2 98 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 E5RI56 91 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 KMOO15229 486 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 FTH1P02794 183 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 SNRPAP09012 282 aaKnown RBP15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 PBLDP30039 288 aaPredicted RBP15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 CCR7P32248 378 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 DPP6P42658 865 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 CLCN7P51798 805 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 HK3P52790 923 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 ZNF460Q14592 562 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 USP10Q14694 798 aaKnown RBP15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 ZKSCAN8Q15776 578 aaPredicted RBP15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 DUOXA1Q1HG43 343 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 KIF19Q2TAC6 998 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 ZNF658BQ4V348 819 aaPredicted RBP15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 PRAMEF14Q5SWL7 426 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 LGSNQ5TDP6 509 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 XKR5Q6UX68 686 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 CHST15Q7LFX5 561 aaPredicted RBP15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 SIDT2Q8NBJ9 832 aaKnown RBP15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 OR2M4Q96R27 311 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 CCM2Q9BSQ5 444 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 ARRDC1-AS1Q9H2J1 176 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 FSCN3Q9NQT6 498 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 DNAJC28Q9NX36 388 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 TAS2R13Q9NYV9 303 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 PLEKHM1Q9Y4G2 1056 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 GPSM3Q9Y4H4 160 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 SNX11Q9Y5W9 270 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 ST14Q9Y5Y6 855 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 LRP4O75096 1905 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 FRYLO94915 3013 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 PI4KAP42356 2102 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 TPP1O14773 563 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 VPS26AO75436 327 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 RASGRP1O95267 797 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 CSF2P04141 144 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 CFIP05156 583 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 ACP5P13686 325 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 CD9P21926 228 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 MPLP40238 635 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 CTSKP43235 329 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 CSRP3P50461 194 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 CCDC6Q16204 474 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 PHACTR4Q8IZ21 702 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 OXR1Q8N573 874 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 LILRA3Q8N6C8 439 aaPredicted RBP15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 SUMF1Q8NBK3 374 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 CD200R1Q8TD46 325 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 ISL2Q96A47 359 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 RUFY1Q96T51 708 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 TMEM168Q9H0V1 697 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 CAPN10Q9HC96 672 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 SNX15Q9NRS6 342 aa15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 SPATS2LQ9NUQ6 558 aaKnown RBP15.54■□□□□ 0.08
CCDC90B-201ENST00000260054 FAM86C1Q9NVL1 165 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms