RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 IFT172Q9UG01 1749 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 E5RJQ4 531 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 INMT-MINDY4F8WBC2 141 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 RFPL2O75678 378 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 IFNW1P05000 195 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 LHCGRP22888 699 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 LHX1P48742 406 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 RARRES1P49788 294 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 TSPAN5P62079 268 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 CNTN2Q02246 1040 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 UAP1L1Q3KQV9 507 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 LINGO2Q7L985 606 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 SSX6Q7RTT6 188 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 PHACTR4Q8IZ21 702 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 C15orf40Q8WUR7 153 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 CANT1Q8WVQ1 401 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 FUZQ9BT04 418 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 FAIM2Q9BWQ8 316 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 PRDM12Q9H4Q4 367 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 RPL36Q9Y3U8 105 aaKnown RBP13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 ENDOD1O94919 500 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 XRCC1P18887 633 aaPredicted RBP13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 HTR2AP28223 471 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 CD97P48960 835 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 ADAM15Q13444 863 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 CPSF6Q16630 551 aaKnown RBP eCLIP13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 PTPRNQ16849 979 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 PPP2R2DQ66LE6 453 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 QSOX2Q6ZRP7 698 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 TRMT11Q7Z4G4 463 aaKnown RBP13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 C12orf50Q8NA57 414 aaPredicted RBP13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 TMEM161BQ8NDZ6 487 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 ZNF548Q8NEK5 533 aaPredicted RBP13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 THAP6Q8TBB0 222 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 TCEAL3Q969E4 200 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 HERC2P3Q9BVR0 1158 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 SLIT3O75094 1523 aa13.02□□□□□ -0.32
PCDHGA3-201ENST00000253812 FOXO6A8MYZ6 492 aa13.02□□□□□ -0.32
PCDHGA3-201ENST00000253812 RP2O75695 350 aa13.02□□□□□ -0.32
PCDHGA3-201ENST00000253812 RSL1D1O76021 490 aaKnown RBP13.02□□□□□ -0.32
PCDHGA3-201ENST00000253812 PLATP00750 562 aa13.02□□□□□ -0.32
PCDHGA3-201ENST00000253812 CYP3A4P08684 503 aa13.02□□□□□ -0.32
PCDHGA3-201ENST00000253812 NUDT7P0C024 238 aa13.02□□□□□ -0.32
PCDHGA3-201ENST00000253812 THEGLP0DJG4 465 aa13.02□□□□□ -0.32
PCDHGA3-201ENST00000253812 COL6A1P12109 1028 aa13.02□□□□□ -0.32
PCDHGA3-201ENST00000253812 BUD31P41223 144 aaPredicted RBP13.02□□□□□ -0.32
PCDHGA3-201ENST00000253812 ADIGQ0VDE8 80 aa13.02□□□□□ -0.32
PCDHGA3-201ENST00000253812 SREBF2Q12772 1141 aa13.02□□□□□ -0.32
PCDHGA3-201ENST00000253812 AP5B1Q2VPB7 878 aa13.02□□□□□ -0.32
PCDHGA3-201ENST00000253812 GPAT3Q53EU6 434 aa13.02□□□□□ -0.32
PCDHGA3-201ENST00000253812 CYP20A1Q6UW02 462 aa13.02□□□□□ -0.32
PCDHGA3-201ENST00000253812 ZYG11AQ6WRX3 759 aa13.02□□□□□ -0.32
PCDHGA3-201ENST00000253812 SPATA6LQ8N4H0 392 aa13.02□□□□□ -0.32
PCDHGA3-201ENST00000253812 ZNF781Q8N8C0 355 aa13.02□□□□□ -0.32
PCDHGA3-201ENST00000253812 TNFRSF25Q93038 417 aa13.02□□□□□ -0.32
PCDHGA3-201ENST00000253812 TCEAL4Q96EI5 215 aa13.02□□□□□ -0.32
PCDHGA3-201ENST00000253812 MRPL45Q9BRJ2 306 aaKnown RBP13.02□□□□□ -0.32
PCDHGA3-201ENST00000253812 FMN2Q9NZ56 1722 aa13.02□□□□□ -0.32
PCDHGA3-201ENST00000253812 MON2Q7Z3U7 1717 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 SLC12A8A0AV02 714 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 DLGAP1O14490 977 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 MAGEB3O15480 346 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 XPNPEP2O43895 674 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 AQP1P29972 269 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 ECHS1P30084 290 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 FMO3P31513 532 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 EFEMP1Q12805 493 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 TMEM44Q2T9K0 475 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 IQCCQ4KMZ1 466 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 LRRC69Q6ZNQ3 347 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 HDDC3Q8N4P3 179 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 C11orf65Q8NCR3 313 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 PCDH19Q8TAB3 1148 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 HEPHQ9BQS7 1158 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 TAS2R9Q9NYW1 312 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 KLK14Q9P0G3 267 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 HCN2Q9UL51 889 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 RBM7Q9Y580 266 aaKnown RBP13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 A8MV72 311 aaPredicted RBP13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 C9IYK1 514 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 ANXA8P13928 327 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 PTPRAP18433 802 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 GJA9P57773 515 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 GRK1Q15835 563 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 LY6KQ17RY6 165 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 CMPK2Q5EBM0 449 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 DCST1Q5T197 706 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 ANKRD13BQ86YJ7 626 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 TWIST2Q8WVJ9 160 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 SNRNP25Q9BV90 132 aaKnown RBP13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 PCDHAC1Q9H158 963 aa13.02□□□□□ -0.33
PCDHGA3-201ENST00000253812 C5orf51A6NDU8 294 aa13.01□□□□□ -0.33
PCDHGA3-201ENST00000253812 PRRG1O14668 218 aa13.01□□□□□ -0.33
PCDHGA3-201ENST00000253812 RFPL1O75677 317 aa13.01□□□□□ -0.33
PCDHGA3-201ENST00000253812 ANXA3P12429 323 aa13.01□□□□□ -0.33
PCDHGA3-201ENST00000253812 TPSB2P20231 275 aa13.01□□□□□ -0.33
PCDHGA3-201ENST00000253812 CCR4P51679 360 aa13.01□□□□□ -0.33
PCDHGA3-201ENST00000253812 TAS2R40P59535 323 aa13.01□□□□□ -0.33
PCDHGA3-201ENST00000253812 TAS2R41P59536 307 aa13.01□□□□□ -0.33
PCDHGA3-201ENST00000253812 TPSAB1Q15661 275 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms