RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 OR2T11Q8NH01 316 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 KCNN1Q92952 543 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 FEM1CQ96JP0 617 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 TSSK3Q96PN8 268 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 RHNO1Q9BSD3 238 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 TRMOQ9BU70 441 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 INIPQ9NRY2 104 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 RIC8BQ9NVN3 520 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 COMMD8Q9NX08 183 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 PDE10AQ9Y233 779 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 ZFC3H1O60293 1989 aaKnown RBP11.83□□□□□ -0.52
USHBP1-201ENST00000252597 C16orf96A6NNT2 1141 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 STX7O15400 261 aaKnown RBP11.83□□□□□ -0.52
USHBP1-201ENST00000252597 CELF2O95319 508 aaKnown RBP11.83□□□□□ -0.52
USHBP1-201ENST00000252597 ANXA6P08133 673 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 SERPINF2P08697 491 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 IL12AP29459 219 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 DAB2P98082 770 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 SCAPQ12770 1279 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 DAG1Q14118 895 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 INTS6LQ5JSJ4 861 aaKnown RBP11.83□□□□□ -0.52
USHBP1-201ENST00000252597 ALKAL1Q6UXT8 129 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 RNF19BQ6ZMZ0 732 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 SYTL1Q8IYJ3 562 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 LGI2Q8N0V4 545 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 KRTCAP2Q8N6L1 136 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 RORBQ92753 470 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 TOP1MTQ969P6 601 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 UBXN10Q96LJ8 280 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 HEPHQ9BQS7 1158 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 ACTR8Q9H981 624 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 KIF17Q9P2E2 1029 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 PSME2Q9UL46 239 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 ACOX3O15254 700 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 S100BP04271 92 aaPredicted RBP11.83□□□□□ -0.52
USHBP1-201ENST00000252597 DBTP11182 482 aaKnown RBP11.83□□□□□ -0.52
USHBP1-201ENST00000252597 PBX3P40426 434 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 HCAR3P49019 387 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 MAPKAPK3Q16644 382 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 C6orf136Q5SQH8 315 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 PTRHD1Q6GMV3 140 aaKnown RBP11.83□□□□□ -0.52
USHBP1-201ENST00000252597 PM20D1Q6GTS8 502 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 FBXL22Q6P050 247 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 KIAA0408Q6ZU52 694 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 Q8N9G6 341 aaPredicted RBP11.83□□□□□ -0.52
USHBP1-201ENST00000252597 ABHD11Q8NFV4 315 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 ZFP90Q8TF47 636 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 FBXO32Q969P5 355 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 CDKN2AIPNLQ96HQ2 116 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 TM6SF2Q9BZW4 377 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 ZYG11BQ9C0D3 744 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 OSER1Q9NX31 292 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 SMPD4Q9NXE4 827 aa11.83□□□□□ -0.52
USHBP1-201ENST00000252597 BBIP1A8MTZ0 92 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 MUSKO15146 869 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 VPS26AO75436 327 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 CLPXO76031 633 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 PORP16435 677 aaPredicted RBP11.82□□□□□ -0.52
USHBP1-201ENST00000252597 IDUAP35475 653 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 ACADVLP49748 655 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 NCS1P62166 190 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 DMPKQ09013 629 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 ARHGEF7Q14155 803 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 SMN1Q16637 294 aaKnown RBP11.82□□□□□ -0.52
USHBP1-201ENST00000252597 LRRC8DQ7L1W4 858 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 DSG4Q86SJ6 1040 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 RASAL3Q86YV0 1011 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 ATG16L2Q8NAA4 619 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 CAPSLQ8WWF8 208 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 NODALQ96S42 347 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 POLR1EQ9GZS1 481 aaKnown RBP11.82□□□□□ -0.52
USHBP1-201ENST00000252597 SYTL2Q9HCH5 934 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 HPS4Q9NQG7 708 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 FARSBQ9NSD9 589 aaKnown RBP11.82□□□□□ -0.52
USHBP1-201ENST00000252597 ATP11BQ9Y2G3 1177 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 A6NL46 340 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 BCAS1O75363 584 aaPredicted RBP11.82□□□□□ -0.52
USHBP1-201ENST00000252597 MTHFD2P13995 350 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 KCNE1P15382 129 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 MC4RP32245 332 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 CD47Q08722 323 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 SFSWAPQ12872 951 aaKnown RBP11.82□□□□□ -0.52
USHBP1-201ENST00000252597 RFTN2Q52LD8 501 aaPredicted RBP11.82□□□□□ -0.52
USHBP1-201ENST00000252597 ARMC12Q5T9G4 340 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 INTS11Q5TA45 600 aaKnown RBP11.82□□□□□ -0.52
USHBP1-201ENST00000252597 SULT1C3Q6IMI6 304 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 LCN8Q6JVE9 175 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 OR56A4Q8NGH8 313 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 NDNFQ8TB73 568 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 MCOLN3Q8TDD5 553 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 TANKQ92844 425 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 RPL3LQ92901 407 aaKnown RBP11.82□□□□□ -0.52
USHBP1-201ENST00000252597 UBE2FQ969M7 185 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 SLC47A1Q96FL8 570 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 TPD52L3Q96J77 140 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 DPY30Q9C005 99 aa11.82□□□□□ -0.52
USHBP1-201ENST00000252597 SDR39U1Q9NRG7 319 aaPredicted RBP11.82□□□□□ -0.52
USHBP1-201ENST00000252597 KRBA1A5PL33 1030 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 NT5C1B-RDH14C9J2C7 533 aa11.81□□□□□ -0.52
USHBP1-201ENST00000252597 FGF10O15520 208 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms