RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 FAM182AQ5T1J6 154 aa13.56□□□□□ -0.24
DDX39A-201ENST00000242776 TMEM26Q6ZUK4 368 aa13.56□□□□□ -0.24
DDX39A-201ENST00000242776 MAMDC2Q7Z304 686 aaPredicted RBP13.56□□□□□ -0.24
DDX39A-201ENST00000242776 APLFQ8IW19 511 aaPredicted RBP13.56□□□□□ -0.24
DDX39A-201ENST00000242776 KATNAL2Q8IYT4 538 aa13.56□□□□□ -0.24
DDX39A-201ENST00000242776 NAPGQ99747 312 aaPredicted RBP13.56□□□□□ -0.24
DDX39A-201ENST00000242776 EPB41L1Q9H4G0 881 aa13.56□□□□□ -0.24
DDX39A-201ENST00000242776 ZNF768Q9H5H4 540 aaKnown RBP13.56□□□□□ -0.24
DDX39A-201ENST00000242776 DTLQ9NZJ0 730 aa13.56□□□□□ -0.24
DDX39A-201ENST00000242776 ZNF624Q9P2J8 865 aaPredicted RBP13.56□□□□□ -0.24
DDX39A-201ENST00000242776 SLC23A2Q9UGH3 650 aa13.56□□□□□ -0.24
DDX39A-201ENST00000242776 PACSIN2Q9UNF0 486 aaPredicted RBP13.56□□□□□ -0.24
DDX39A-201ENST00000242776 C1orf232A0A0U1RR37 186 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 CTAGE9A4FU28 777 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 A6NL46 340 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 ESPNB1AK53 854 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 FZD6O60353 706 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 ZNF30P17039 623 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 RPL10P27635 214 aaKnown RBP13.55□□□□□ -0.24
DDX39A-201ENST00000242776 CASQ1P31415 396 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 SLC19A1P41440 591 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 HCAR3P49019 387 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 CDH6P55285 790 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 IL10RAQ13651 578 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 DPYSL2Q16555 572 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 SEL1L2Q5TEA6 688 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 FAM69BQ5VUD6 431 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 PWWP2BQ6NUJ5 590 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 CERS6Q6ZMG9 384 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 VSIG1Q86XK7 387 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 KCTD6Q8NC69 237 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 CSPG4P5Q96PW8 444 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 ING2Q9H160 280 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 FAM83DQ9H4H8 585 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 SLAMF7Q9NQ25 335 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 CUEDC1Q9NWM3 386 aaPredicted RBP13.55□□□□□ -0.24
DDX39A-201ENST00000242776 CELSR2Q9HCU4 2923 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 LRRD1A4D1F6 860 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 OR5K4A6NMS3 321 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 OR52A4PA6NMU1 304 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 NUAK1O60285 661 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 MTX2O75431 263 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 SORBS2O94875 1100 aaKnown RBP13.55□□□□□ -0.24
DDX39A-201ENST00000242776 ZRANB2O95218 330 aaKnown RBP eCLIP13.55□□□□□ -0.243e-7■■■■□ 25.7
DDX39A-201ENST00000242776 FGF5P12034 268 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 FOLR1P15328 257 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 DRG2P55039 364 aaKnown RBP13.55□□□□□ -0.24
DDX39A-201ENST00000242776 TUBB3Q13509 450 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 RAPSNQ13702 412 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 HENMT1Q5T8I9 393 aaKnown RBP13.55□□□□□ -0.24
DDX39A-201ENST00000242776 TXNRD3NBQ6F5E7 133 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 CCDC50Q8IVM0 306 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 RCOR2Q8IZ40 523 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 KRT35Q92764 455 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 C19orf60Q96EN9 201 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 ZNF670Q9BS34 389 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 MLPHQ9BV36 600 aaPredicted RBP13.55□□□□□ -0.24
DDX39A-201ENST00000242776 SPATA16Q9BXB7 569 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 POLR1EQ9GZS1 481 aaKnown RBP13.55□□□□□ -0.24
DDX39A-201ENST00000242776 BRD8Q9H0E9 1235 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 PCDHGA6Q9Y5G7 932 aa13.55□□□□□ -0.24
DDX39A-201ENST00000242776 ZNF487B1APH4 448 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 ZNF185O15231 689 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 DDX3YO15523 660 aaKnown RBP13.54□□□□□ -0.24
DDX39A-201ENST00000242776 MT-ND3P03897 115 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 EBLN1P0CF75 366 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 KDELR1P24390 212 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 IL4RP24394 825 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 PTPN4P29074 926 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 PTGIRP43119 386 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 SPINT3P49223 89 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 COPS2P61201 443 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 RPS15P62841 145 aaKnown RBP13.54□□□□□ -0.24
DDX39A-201ENST00000242776 MMRN1Q13201 1228 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 GPR18Q14330 331 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 NR6A1Q15406 480 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 UGT8Q16880 541 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 RALGPS1Q5JS13 557 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 JMJD6Q6NYC1 403 aaPredicted RBP13.54□□□□□ -0.24
DDX39A-201ENST00000242776 SYT10Q6XYQ8 523 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 NLRP8Q86W28 1048 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 SIDT2Q8NBJ9 832 aaKnown RBP13.54□□□□□ -0.24
DDX39A-201ENST00000242776 MR1Q95460 341 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 TCTN2Q96GX1 697 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 TLR10Q9BXR5 811 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 TDRD1Q9BXT4 1180 aaKnown RBP13.54□□□□□ -0.24
DDX39A-201ENST00000242776 CARD9Q9H257 536 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 RMI1Q9H9A7 625 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 PCDH9Q9HC56 1237 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 PCDH18Q9HCL0 1135 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 PDE7BQ9NP56 450 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 PKD2L2Q9NZM6 624 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 ERRFI1Q9UJM3 462 aaPredicted RBP13.54□□□□□ -0.24
DDX39A-201ENST00000242776 RARRES3Q9UL19 164 aa13.54□□□□□ -0.24
DDX39A-201ENST00000242776 IGHV5-51A0A0C4DH38 117 aa13.53□□□□□ -0.24
DDX39A-201ENST00000242776 C21orf140B9A014 251 aa13.53□□□□□ -0.24
DDX39A-201ENST00000242776 ZNF500O60304 480 aaPredicted RBP13.53□□□□□ -0.24
DDX39A-201ENST00000242776 SLC25A14O95258 325 aaPredicted RBP13.53□□□□□ -0.24
DDX39A-201ENST00000242776 DDAH2O95865 285 aa13.53□□□□□ -0.24
DDX39A-201ENST00000242776 PRLP01236 227 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms