RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 SHCBP1LQ9BZQ2 653 aa14.99□□□□□ -0.01
HDHD3-201ENST00000238379 MKRN2Q9H000 416 aaKnown RBP14.99□□□□□ -0.01
HDHD3-201ENST00000238379 COG4Q9H9E3 785 aa14.99□□□□□ -0.01
HDHD3-201ENST00000238379 DNAJC28Q9NX36 388 aa14.99□□□□□ -0.01
HDHD3-201ENST00000238379 SERGEFQ9UGK8 458 aa14.99□□□□□ -0.01
HDHD3-201ENST00000238379 A0A1W2PQF6 199 aa14.99□□□□□ -0.01
HDHD3-201ENST00000238379 K7ESM1 405 aa14.99□□□□□ -0.01
HDHD3-201ENST00000238379 SUPT7LO94864 414 aa14.99□□□□□ -0.01
HDHD3-201ENST00000238379 SIX3O95343 332 aaPredicted RBP14.99□□□□□ -0.01
HDHD3-201ENST00000238379 ASGR2P07307 311 aa14.99□□□□□ -0.01
HDHD3-201ENST00000238379 CBSLP0DN79 551 aa14.99□□□□□ -0.01
HDHD3-201ENST00000238379 MSH3P20585 1137 aa14.99□□□□□ -0.01
HDHD3-201ENST00000238379 AOAHP28039 575 aa14.99□□□□□ -0.01
HDHD3-201ENST00000238379 CBSP35520 551 aa14.99□□□□□ -0.01
HDHD3-201ENST00000238379 GRSF1Q12849 480 aaKnown RBP eCLIP14.99□□□□□ -0.01
HDHD3-201ENST00000238379 BNIP1Q12981 228 aa14.99□□□□□ -0.01
HDHD3-201ENST00000238379 TUBB3Q13509 450 aa14.99□□□□□ -0.01
HDHD3-201ENST00000238379 GBX1Q14549 363 aa14.99□□□□□ -0.01
HDHD3-201ENST00000238379 TGFBIQ15582 683 aa14.99□□□□□ -0.01
HDHD3-201ENST00000238379 VWA5B1Q5TIE3 1220 aa14.99□□□□□ -0.01
HDHD3-201ENST00000238379 EPGNQ6UW88 154 aa14.99□□□□□ -0.01
HDHD3-201ENST00000238379 SBSNQ6UWP8 590 aa14.99□□□□□ -0.01
HDHD3-201ENST00000238379 RAB44Q7Z6P3 723 aaPredicted RBP14.99□□□□□ -0.01
HDHD3-201ENST00000238379 CLNKQ7Z7G1 428 aa14.99□□□□□ -0.01
HDHD3-201ENST00000238379 ADAMTSL2Q86TH1 951 aa14.99□□□□□ -0.01
HDHD3-201ENST00000238379 HDDC3Q8N4P3 179 aa14.99□□□□□ -0.01
HDHD3-201ENST00000238379 CXorf40AQ8TE69 158 aa14.99□□□□□ -0.01
HDHD3-201ENST00000238379 CD248Q9HCU0 757 aa14.99□□□□□ -0.01
HDHD3-201ENST00000238379 TSR3Q9UJK0 312 aaKnown RBP14.99□□□□□ -0.01
HDHD3-201ENST00000238379 SLC12A4Q9UP95 1085 aa14.99□□□□□ -0.01
HDHD3-201ENST00000238379 LRRC14BA6NHZ5 514 aa14.98□□□□□ -0.01
HDHD3-201ENST00000238379 SHISA7A6NL88 538 aa14.98□□□□□ -0.01
HDHD3-201ENST00000238379 STX16-NPEPL1H3BU86 382 aa14.98□□□□□ -0.01
HDHD3-201ENST00000238379 UBFD1O14562 309 aaKnown RBP14.98□□□□□ -0.01
HDHD3-201ENST00000238379 STX16O14662 325 aa14.98□□□□□ -0.01
HDHD3-201ENST00000238379 INPP4BO15327 924 aa14.98□□□□□ -0.01
HDHD3-201ENST00000238379 HDAC3O15379 428 aa14.98□□□□□ -0.01
HDHD3-201ENST00000238379 GRID2O43424 1007 aa14.98□□□□□ -0.01
HDHD3-201ENST00000238379 TSPAN6O43657 245 aa14.98□□□□□ -0.01
HDHD3-201ENST00000238379 KLF8O95600 359 aaPredicted RBP14.98□□□□□ -0.01
HDHD3-201ENST00000238379 STARD3Q14849 445 aa14.98□□□□□ -0.01
HDHD3-201ENST00000238379 SKIV2LQ15477 1246 aaKnown RBP14.98□□□□□ -0.01
HDHD3-201ENST00000238379 PPP1R3AQ16821 1122 aa14.98□□□□□ -0.01
HDHD3-201ENST00000238379 ALYREFQ86V81 257 aaKnown RBP14.98□□□□□ -0.01
HDHD3-201ENST00000238379 RASGEF1AQ8N9B8 481 aa14.98□□□□□ -0.01
HDHD3-201ENST00000238379 MAPK15Q8TD08 544 aa14.98□□□□□ -0.01
HDHD3-201ENST00000238379 RRP15Q9Y3B9 282 aaKnown RBP14.98□□□□□ -0.01
HDHD3-201ENST00000238379 SPTBN5Q9NRC6 3674 aaKnown RBP14.97□□□□□ -0.01
HDHD3-201ENST00000238379 MYO10Q9HD67 2058 aa14.97□□□□□ -0.01
HDHD3-201ENST00000238379 A0A1W2PP55 124 aa14.97□□□□□ -0.01
HDHD3-201ENST00000238379 EIF3FO00303 357 aaPredicted RBP14.97□□□□□ -0.01
HDHD3-201ENST00000238379 NARSO43776 548 aaKnown RBP14.97□□□□□ -0.01
HDHD3-201ENST00000238379 HOXB2P14652 356 aa14.97□□□□□ -0.01
HDHD3-201ENST00000238379 GLULP15104 373 aa14.97□□□□□ -0.01
HDHD3-201ENST00000238379 COL9A1P20849 921 aa14.97□□□□□ -0.01
HDHD3-201ENST00000238379 ALDH18A1P54886 795 aaKnown RBP14.97□□□□□ -0.01
HDHD3-201ENST00000238379 ZBTB16Q05516 673 aa14.97□□□□□ -0.01
HDHD3-201ENST00000238379 TMEM115Q12893 351 aaPredicted RBP14.97□□□□□ -0.01
HDHD3-201ENST00000238379 SPDYAQ5MJ70 313 aa14.97□□□□□ -0.01
HDHD3-201ENST00000238379 PHYKPLQ8IUZ5 450 aa14.97□□□□□ -0.01
HDHD3-201ENST00000238379 FAM131CQ96AQ9 280 aa14.97□□□□□ -0.01
HDHD3-201ENST00000238379 RILPQ96NA2 401 aa14.97□□□□□ -0.01
HDHD3-201ENST00000238379 C1QTNF3Q9BXJ4 246 aa14.97□□□□□ -0.01
HDHD3-201ENST00000238379 FBRSQ9HAH7 460 aa14.97□□□□□ -0.01
HDHD3-201ENST00000238379 EML4Q9HC35 981 aaKnown RBP14.97□□□□□ -0.01
HDHD3-201ENST00000238379 TNFRSF12AQ9NP84 129 aa14.97□□□□□ -0.01
HDHD3-201ENST00000238379 UTP6Q9NYH9 597 aaKnown RBP14.97□□□□□ -0.01
HDHD3-201ENST00000238379 ZFP69BQ9UJL9 534 aa14.97□□□□□ -0.01
HDHD3-201ENST00000238379 ADAMTS6Q9UKP5 1117 aa14.97□□□□□ -0.01
HDHD3-201ENST00000238379 TMCO1Q9UM00 188 aa14.97□□□□□ -0.01
HDHD3-201ENST00000238379 IGLON5A6NGN9 336 aa14.96□□□□□ -0.01
HDHD3-201ENST00000238379 NCF1BA6NI72 391 aaPredicted RBP14.96□□□□□ -0.01
HDHD3-201ENST00000238379 OR2AG2A6NM03 316 aa14.96□□□□□ -0.01
HDHD3-201ENST00000238379 NCF1CA8MVU1 366 aaPredicted RBP14.96□□□□□ -0.01
HDHD3-201ENST00000238379 SLCO1B7G3V0H7 640 aa14.96□□□□□ -0.01
HDHD3-201ENST00000238379 QSOX1O00391 747 aa14.96□□□□□ -0.01
HDHD3-201ENST00000238379 RNASEH2AO75792 299 aaKnown RBP14.96□□□□□ -0.01
HDHD3-201ENST00000238379 FTH1P02794 183 aa14.96□□□□□ -0.01
HDHD3-201ENST00000238379 ENO3P13929 434 aaPredicted RBP14.96□□□□□ -0.01
HDHD3-201ENST00000238379 NCF1P14598 390 aaPredicted RBP14.96□□□□□ -0.01
HDHD3-201ENST00000238379 EEF1DP29692 281 aaKnown RBP14.96□□□□□ -0.01
HDHD3-201ENST00000238379 GPR1P46091 355 aa14.96□□□□□ -0.01
HDHD3-201ENST00000238379 CTSCP53634 463 aa14.96□□□□□ -0.01
HDHD3-201ENST00000238379 CDH13P55290 713 aa14.96□□□□□ -0.01
HDHD3-201ENST00000238379 MRPS21P82921 87 aaKnown RBP14.96□□□□□ -0.01
HDHD3-201ENST00000238379 HSPA14Q0VDF9 509 aa14.96□□□□□ -0.01
HDHD3-201ENST00000238379 SMAD2Q15796 467 aaKnown RBP14.96□□□□□ -0.01
HDHD3-201ENST00000238379 SH2D4BQ5SQS7 431 aa14.96□□□□□ -0.01
HDHD3-201ENST00000238379 PLEKHS1Q5SXH7 462 aa14.96□□□□□ -0.01
HDHD3-201ENST00000238379 RAET1GQ6H3X3 334 aa14.96□□□□□ -0.01
HDHD3-201ENST00000238379 CUZD1Q86UP6 607 aa14.96□□□□□ -0.01
HDHD3-201ENST00000238379 BEND7Q8N7W2 519 aaPredicted RBP14.96□□□□□ -0.01
HDHD3-201ENST00000238379 PRUNE2Q8WUY3 3088 aa14.96□□□□□ -0.01
HDHD3-201ENST00000238379 DLG3Q92796 817 aa14.96□□□□□ -0.01
HDHD3-201ENST00000238379 PRR11Q96HE9 360 aaPredicted RBP14.96□□□□□ -0.01
HDHD3-201ENST00000238379 NSUN5Q96P11 429 aaKnown RBP14.96□□□□□ -0.01
HDHD3-201ENST00000238379 CDX2Q99626 313 aaPredicted RBP14.96□□□□□ -0.01
HDHD3-201ENST00000238379 FAM126AQ9BYI3 521 aaPredicted RBP14.96□□□□□ -0.01
HDHD3-201ENST00000238379 NMUR2Q9GZQ4 415 aa14.96□□□□□ -0.01
HDHD3-201ENST00000238379 NUDT4Q9NZJ9 180 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms