RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 AP5B1Q2VPB7 878 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.03□□□□□ -0.96
SYDE2-201ENST00000234668 LPCAT2Q7L5N7 544 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 CLVS1Q8IUQ0 354 aaPredicted RBP9.03□□□□□ -0.96
SYDE2-201ENST00000234668 MINDY1Q8N5J2 469 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 KRTCAP2Q8N6L1 136 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 ARL14EPQ8N8R7 260 aaPredicted RBP9.03□□□□□ -0.96
SYDE2-201ENST00000234668 OR56A4Q8NGH8 313 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 SGCDQ92629 289 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 ADI1Q9BV57 179 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 IPPKQ9H8X2 491 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 INTS10Q9NVR2 710 aaKnown RBP9.03□□□□□ -0.96
SYDE2-201ENST00000234668 AIG1Q9NVV5 245 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 HACD3Q9P035 362 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 CHD7Q9P2D1 2997 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 HSFX1Q9UBD0 423 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 SUN2Q9UH99 717 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 SLC30A1Q9Y6M5 507 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 PATJQ8NI35 1801 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 KANSL1LA0AUZ9 987 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 CLOCKO15516 846 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 DFNA5O60443 496 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 SH3BGRLO75368 114 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 SLC25A14O95258 325 aaPredicted RBP9.02□□□□□ -0.96
SYDE2-201ENST00000234668 C1QCP02747 245 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 ASLP04424 464 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 GSNP06396 782 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 UROSP10746 265 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 MBL2P11226 248 aaPredicted RBP9.02□□□□□ -0.96
SYDE2-201ENST00000234668 HMGA1P17096 107 aaKnown RBP9.02□□□□□ -0.96
SYDE2-201ENST00000234668 HRH2P25021 359 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 CSKP41240 450 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 HSPA13P48723 471 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 TXNL4AP83876 142 aaKnown RBP9.02□□□□□ -0.96
SYDE2-201ENST00000234668 MERTKQ12866 999 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 C11orf91Q3C1V1 193 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 GTDC1Q4AE62 458 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 ATP6AP1LQ52LC2 224 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 GLYATQ6IB77 296 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 SERPINA9Q86WD7 417 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 PHACTR4Q8IZ21 702 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 ADGRG2Q8IZP9 1017 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 NKAPQ8N5F7 415 aaKnown RBP9.02□□□□□ -0.96
SYDE2-201ENST00000234668 FBXO30Q8TB52 745 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 RAET1EQ8TD07 263 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 SKA2Q8WVK7 121 aaPredicted RBP9.02□□□□□ -0.96
SYDE2-201ENST00000234668 FIG4Q92562 907 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 AURKBQ96GD4 344 aaPredicted RBP9.02□□□□□ -0.96
SYDE2-201ENST00000234668 CHID1Q9BWS9 393 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 VN1R3Q9BXE9 311 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 ASB8Q9H765 288 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 ELOVL2Q9NXB9 296 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 ACTR3BQ9P1U1 418 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 ABCD2Q9UBJ2 740 aa9.02□□□□□ -0.96
SYDE2-201ENST00000234668 CASP8AP2Q9UKL3 1982 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.02□□□□□ -0.97
SYDE2-201ENST00000234668 SYCE1LA8MT33 242 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 ACOX3O15254 700 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 CLDN11O75508 207 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 TRMUO75648 421 aaKnown RBP9.02□□□□□ -0.97
SYDE2-201ENST00000234668 BMP2P12643 396 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 ALDH7A1P49419 539 aaKnown RBP9.02□□□□□ -0.97
SYDE2-201ENST00000234668 ATP6V0D1P61421 351 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 RPL38P63173 70 aaKnown RBP9.02□□□□□ -0.97
SYDE2-201ENST00000234668 SP3Q02447 781 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 SREBF2Q12772 1141 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 NEDD8Q15843 81 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 ADGRF1Q5T601 910 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 GOLGA7Q7Z5G4 137 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 GALNT7Q86SF2 657 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 TSPAN33Q86UF1 283 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 TMEM126BQ8IUX1 230 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 RNF175Q8N4F7 328 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 TTC30BQ8N4P2 665 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 TRPV3Q8NET8 790 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 GFM2Q969S9 779 aaKnown RBP9.02□□□□□ -0.97
SYDE2-201ENST00000234668 ZFRQ96KR1 1074 aaKnown RBP9.02□□□□□ -0.97
SYDE2-201ENST00000234668 NAA50Q9GZZ1 169 aaKnown RBP9.02□□□□□ -0.97
SYDE2-201ENST00000234668 SMG9Q9H0W8 520 aaKnown RBP9.02□□□□□ -0.97
SYDE2-201ENST00000234668 ACTL8Q9H568 366 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 AGPAT4Q9NRZ5 378 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 EXD2Q9NVH0 621 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 TRPM5Q9NZQ8 1165 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 C1orf232A0A0U1RR37 186 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 OR7A17O14581 309 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 TBC1D4O60343 1298 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 PRAMEF1O95521 474 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 NR4A1P22736 598 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 ELK4P28324 431 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 TTPAP49638 278 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 ATP4BP51164 291 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 CLCN7P51798 805 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 NEK2P51955 445 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 PIGFQ07326 219 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 DYNC1I2Q13409 638 aaKnown RBP9.02□□□□□ -0.97
SYDE2-201ENST00000234668 RCAN2Q14206 197 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 DET1Q7L5Y6 550 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 ANKRD46Q86W74 232 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 FAM126BQ8IXS8 530 aa9.02□□□□□ -0.97
SYDE2-201ENST00000234668 TMEM199Q8N511 208 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms