RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 ERICH5Q6P6B1 374 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 IFNLR1Q8IU57 520 aaPredicted RBP13.25□□□□□ -0.29
NEK4-201ENST00000233027 ZNF563Q8TA94 476 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 PCDH19Q8TAB3 1148 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 DSN1Q9H410 356 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 SNX7Q9UNH6 387 aa13.25□□□□□ -0.29
NEK4-201ENST00000233027 H3BNX3 289 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 STX16-NPEPL1H3BU86 382 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 STX16O14662 325 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 TMEM63AO94886 807 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 IFNGP01579 166 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 PCCBP05166 539 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 RPS6KA3P51812 740 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 HSF2Q03933 536 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 OAFQ86UD1 273 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 TCAIMQ8N3R3 496 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 PJA1Q8NG27 643 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 ZNF570Q96NI8 536 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 PDE10AQ9Y233 779 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 SQORQ9Y6N5 450 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 IGLV3-22A0A075B6J6 115 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 CXCR6O00574 342 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 MATN3O15232 486 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 ATG13O75143 517 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 TGFBR2P37173 567 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 ASPAP45381 313 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 PLET1Q6UQ28 207 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 SLC51AQ86UW1 340 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.24□□□□□ -0.29
NEK4-201ENST00000233027 SLC43A3Q8NBI5 491 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 OR8D1Q8WZ84 308 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 SLC9A6Q92581 669 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 TOP1MTQ969P6 601 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 GSDMCQ9BYG8 508 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 ZDHHC18Q9NUE0 388 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 CACNG4Q9UBN1 327 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 SUCOQ9UBS9 1254 aaKnown RBP13.24□□□□□ -0.29
NEK4-201ENST00000233027 COL1A2P08123 1366 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 TRBV23OR9-2A0A075B6M9 112 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 A0A1W2PQ67 120 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 FADS2P1A8MWK0 482 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 H3BM21 787 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 S100A9P06702 114 aaKnown RBP13.24□□□□□ -0.29
NEK4-201ENST00000233027 GPIP06744 558 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 HSPB3Q12988 150 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 TUSC3Q13454 348 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 SF1Q15637 639 aaKnown RBP13.24□□□□□ -0.29
NEK4-201ENST00000233027 INTS6LQ5JSJ4 861 aaKnown RBP13.24□□□□□ -0.29
NEK4-201ENST00000233027 FAM129CQ86XR2 697 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 CPNE9Q8IYJ1 553 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 ADAMTS15Q8TE58 950 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 DMRTB1Q96MA1 342 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 FTHL17Q9BXU8 183 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 SP140LQ9H930 580 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 GRM6O15303 877 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 KRT33AO76009 404 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 RHOQP17081 205 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 ITPKBP27987 946 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 CHRNA4P43681 627 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 SCRN3Q0VDG4 424 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 ALG11Q2TAA5 492 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 DCST1Q5T197 706 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 PSMG2Q969U7 264 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 NKX1-2Q9UD57 310 aaPredicted RBP13.24□□□□□ -0.29
NEK4-201ENST00000233027 FBXL21Q9UKT6 434 aa13.24□□□□□ -0.29
NEK4-201ENST00000233027 C9IYK1 514 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 WWP2O00308 870 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 NDUFS2O75306 463 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 VNN1O95497 513 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 CLK3P49761 638 aaKnown RBP13.23□□□□□ -0.29
NEK4-201ENST00000233027 GJA9P57773 515 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 TMPRSS11AQ6ZMR5 421 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 ROPN1LQ96C74 230 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 CDK15Q96Q40 435 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 TTPALQ9BTX7 342 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 TAS2R1Q9NYW7 299 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 AFDNP55196 1824 aaKnown RBP13.23□□□□□ -0.29
NEK4-201ENST00000233027 IRGMA1A4Y4 181 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 CCL16O15467 120 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 UNGP13051 313 aaPredicted RBP13.23□□□□□ -0.29
NEK4-201ENST00000233027 IRAK1BP1Q5VVH5 260 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 TMEM198Q66K66 360 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 TAF8Q7Z7C8 310 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 JAZF1Q86VZ6 243 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 SERPINA9Q86WD7 417 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 UNC5BQ8IZJ1 945 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 AIF1LQ9BQI0 150 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 WRAP53Q9BUR4 548 aaKnown RBP13.23□□□□□ -0.29
NEK4-201ENST00000233027 AASDHPPTQ9NRN7 309 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 EXD2Q9NVH0 621 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 FKBPLQ9UIM3 349 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 DCCP43146 1447 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 TTC24A2A3L6 582 aaPredicted RBP13.23□□□□□ -0.29
NEK4-201ENST00000233027 OR6C75A6NL08 312 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 PLK4O00444 970 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 DHFRP00374 187 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 PTPN9P43378 593 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 AKR1D1P51857 326 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 WDR4P57081 412 aaKnown RBP13.23□□□□□ -0.29
NEK4-201ENST00000233027 FCHO2Q0JRZ9 810 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms