RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 KCNA7Q96RP8 456 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 IKZF3Q9UKT9 509 aa21.94■■□□□ 1.1
CCDC9-201ENST00000221922 TRIM64CA6NLI5 447 aa21.93■■□□□ 1.1
CCDC9-201ENST00000221922 E5RI56 91 aa21.93■■□□□ 1.1
CCDC9-201ENST00000221922 IL10P22301 178 aa21.93■■□□□ 1.1
CCDC9-201ENST00000221922 ITGB8P26012 769 aa21.93■■□□□ 1.1
CCDC9-201ENST00000221922 AP1S1P61966 158 aa21.93■■□□□ 1.1
CCDC9-201ENST00000221922 CACNG1Q06432 222 aa21.93■■□□□ 1.1
CCDC9-201ENST00000221922 KCTD21Q4G0X4 260 aa21.93■■□□□ 1.1
CCDC9-201ENST00000221922 LRRC23Q53EV4 343 aaPredicted RBP21.93■■□□□ 1.1
CCDC9-201ENST00000221922 DCAF4L2Q8NA75 395 aa21.93■■□□□ 1.1
CCDC9-201ENST00000221922 CD200R1Q8TD46 325 aa21.93■■□□□ 1.1
CCDC9-201ENST00000221922 ALG14Q96F25 216 aa21.93■■□□□ 1.1
CCDC9-201ENST00000221922 MAGEE1Q9HCI5 957 aa21.93■■□□□ 1.1
CCDC9-201ENST00000221922 BPIFA1Q9NP55 256 aa21.93■■□□□ 1.1
CCDC9-201ENST00000221922 SEMA4BQ9NPR2 832 aaPredicted RBP21.93■■□□□ 1.1
CCDC9-201ENST00000221922 ZNF711Q9Y462 761 aa21.93■■□□□ 1.1
CCDC9-201ENST00000221922 PCDHA9Q9Y5H5 950 aa21.93■■□□□ 1.1
CCDC9-201ENST00000221922 GPR45Q9Y5Y3 372 aa21.93■■□□□ 1.1
CCDC9-201ENST00000221922 FZD6O60353 706 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 OR1I1O60431 355 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 TSPAN12O95859 305 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 CHEK2O96017 543 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 LINC00032P0C843 101 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 PRR35P0CG20 571 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 NELFEP18615 380 aaKnown RBP21.92■■□□□ 1.1
CCDC9-201ENST00000221922 GRIK2Q13002 908 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 CDH18Q13634 790 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 EPHX4Q8IUS5 362 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 SIDT2Q8NBJ9 832 aaKnown RBP21.92■■□□□ 1.1
CCDC9-201ENST00000221922 TMIGD2Q96BF3 282 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 LINGO1Q96FE5 620 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 YME1L1Q96TA2 773 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 GPR63Q9BZJ6 419 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 ZBP1Q9H171 429 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 IL17CQ9P0M4 197 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 VPS51Q9UID3 782 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 PCDHB9Q9Y5E1 797 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 SLC30A1Q9Y6M5 507 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 GIPC1O14908 333 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 SNX2O60749 519 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 CDK4P11802 303 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 CHRM3P20309 590 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 PSMA4P25789 261 aaKnown RBP21.92■■□□□ 1.1
CCDC9-201ENST00000221922 CSKP41240 450 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 CAPRIN1Q14444 709 aaKnown RBP21.92■■□□□ 1.1
CCDC9-201ENST00000221922 ARMC12Q5T9G4 340 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 TAS2R42Q7RTR8 314 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 SPATA19Q7Z5L4 167 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 GPSM1Q86YR5 675 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 CBR4Q8N4T8 237 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 FAM47BQ8NA70 645 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 DRAXINQ8NBI3 349 aaPredicted RBP21.92■■□□□ 1.1
CCDC9-201ENST00000221922 SLC30A3Q99726 388 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 TRIM54Q9BYV2 358 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 MUC13Q9H3R2 512 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 TUBA8Q9NY65 449 aaPredicted RBP21.92■■□□□ 1.1
CCDC9-201ENST00000221922 GALPQ9UBC7 116 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 LSM7Q9UK45 103 aaKnown RBP21.92■■□□□ 1.1
CCDC9-201ENST00000221922 PCTPQ9UKL6 214 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 AURKCQ9UQB9 309 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 PCDHB1Q9Y5F3 818 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 PTPRSQ13332 1948 aa21.92■■□□□ 1.1
CCDC9-201ENST00000221922 A0A1B0GTL3 188 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 SAC3D1A6NKF1 404 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 SCAMP3O14828 347 aaKnown RBP21.91■■□□□ 1.1
CCDC9-201ENST00000221922 ESRRBO95718 433 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 MYF6P23409 242 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 FASP25445 335 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 YBX1P67809 324 aaKnown RBP21.91■■□□□ 1.1
CCDC9-201ENST00000221922 RPS6KA2Q15349 733 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 LRRC26Q2I0M4 334 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 CERS6Q6ZMG9 384 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 ERI1Q8IV48 349 aaKnown RBP21.91■■□□□ 1.1
CCDC9-201ENST00000221922 ADGRG5Q8IZF4 528 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 OR56A4Q8NGH8 313 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 MRPS31Q92665 395 aaKnown RBP21.91■■□□□ 1.1
CCDC9-201ENST00000221922 SMOXQ9NWM0 555 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 EGFL7Q9UHF1 273 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 PTBP2Q9UKA9 531 aaKnown RBP21.91■■□□□ 1.1
CCDC9-201ENST00000221922 A0A1W2PP18 115 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 ARPC2O15144 300 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 BAIAP3O94812 1187 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 CTSAP10619 480 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 C7P10643 843 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 UROSP10746 265 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 GABRR2P28476 465 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 HMGCLP35914 325 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 FAM81AQ8TBF8 368 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 EEF1AKMT1Q8WVE0 214 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 TMEM125Q96AQ2 219 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 CENPNQ96H22 339 aaPredicted RBP21.91■■□□□ 1.1
CCDC9-201ENST00000221922 MYO19Q96H55 970 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 C8orf4Q9NR00 106 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 BTRCQ9Y297 605 aa21.91■■□□□ 1.1
CCDC9-201ENST00000221922 FNDC3AQ9Y2H6 1198 aaKnown RBP21.91■■□□□ 1.1
CCDC9-201ENST00000221922 FCF1Q9Y324 198 aaKnown RBP21.91■■□□□ 1.1
CCDC9-201ENST00000221922 TRIM64A6NGJ6 449 aa21.9■■□□□ 1.1
CCDC9-201ENST00000221922 TGM5O43548 720 aa21.9■■□□□ 1.1
CCDC9-201ENST00000221922 GPIP06744 558 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms