RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 FBXO15Q8NCQ5 510 aaPredicted RBP18.75■□□□□ 0.59
SMPD3-201ENST00000219334 HAPLN3Q96S86 360 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 DPYSL5Q9BPU6 564 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 CCNB1IP1Q9NPC3 277 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 COMMD9Q9P000 198 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 PCDHGA11Q9Y5H2 935 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 IGKV6D-41A0A0C4DH26 115 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 KERAO60938 352 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 PCSK2P16519 638 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 CCKBRP32239 447 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 RYKP34925 604 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 CPT1BQ92523 772 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 SUSD3Q96L08 255 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 GPER1Q99527 375 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 MRPS30Q9NP92 439 aaKnown RBP18.74■□□□□ 0.59
SMPD3-201ENST00000219334 SLC17A7Q9P2U7 560 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 CPN2P22792 545 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 RFC2P35250 354 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 RABGGTBP53611 331 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 LIMK2P53671 638 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 MPP4Q96JB8 637 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 A0A0U1RQF3 1178 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 DDX3YO15523 660 aaKnown RBP18.74■□□□□ 0.59
SMPD3-201ENST00000219334 PFKMP08237 780 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 NDUFS1P28331 727 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 GHRHRQ02643 423 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 TBC1D25Q3MII6 688 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 AMIGO2Q86SJ2 522 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 GJD3Q8N144 294 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 PPM1MQ96MI6 270 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 UNC93B1Q9H1C4 597 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 DNAJC28Q9NX36 388 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 PLIN4Q96Q06 1357 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 GNAZP19086 355 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 IL12RB1P42701 662 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 PDX1P52945 283 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 CASP9P55211 416 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 PTP4A2Q12974 167 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 DAW1Q8N136 415 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 TRNT1Q96Q11 434 aaKnown RBP18.74■□□□□ 0.59
SMPD3-201ENST00000219334 SUV39H2Q9H5I1 410 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 WDR55Q9H6Y2 383 aaPredicted RBP18.74■□□□□ 0.59
SMPD3-201ENST00000219334 SLCO1B3Q9NPD5 702 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 SIRPGQ9P1W8 387 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 CKLFQ9UBR5 152 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 IL36AQ9UHA7 158 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 CDC14AQ9UNH5 594 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 SSR3Q9UNL2 185 aa18.74■□□□□ 0.59
SMPD3-201ENST00000219334 C9J4A7 227 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 STX16-NPEPL1H3BU86 382 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 STX16O14662 325 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 SLC7A4O43246 635 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 PSMD7P51665 324 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 EOGTQ5NDL2 527 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 ALYREFQ86V81 257 aaKnown RBP18.73■□□□□ 0.59
SMPD3-201ENST00000219334 SUN3Q8TAQ9 357 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 HCAR2Q8TDS4 363 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 NTPCRQ9BSD7 190 aaKnown RBP18.73■□□□□ 0.59
SMPD3-201ENST00000219334 TBC1D10AQ9BXI6 508 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 SLIT3O75094 1523 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 UROSP10746 265 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 HSD17B2P37059 387 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 CDK9P50750 372 aaKnown RBP18.73■□□□□ 0.59
SMPD3-201ENST00000219334 MMAAQ8IVH4 418 aaKnown RBP18.73■□□□□ 0.59
SMPD3-201ENST00000219334 TBC1D21Q8IYX1 336 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 ZHX1-C8orf76Q96EF9 292 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 NPAS2Q99743 824 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 TMEM138Q9NPI0 162 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 TLR9Q9NR96 1032 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 BTBD3Q9Y2F9 522 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 NEURL4Q96JN8 1562 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 TLX3O43711 291 aaPredicted RBP18.73■□□□□ 0.59
SMPD3-201ENST00000219334 RPS24P62847 133 aaKnown RBP18.73■□□□□ 0.59
SMPD3-201ENST00000219334 RASGEF1CQ8N431 466 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 IRAK3Q9Y616 596 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 IQCMA0A1B0GVH7 501 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 LIN7AO14910 233 aaPredicted RBP18.73■□□□□ 0.59
SMPD3-201ENST00000219334 PGRMC2O15173 223 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 CTSKP43235 329 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 SOWAHAQ2M3V2 549 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 LRRC73Q5JTD7 316 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 CPNE9Q8IYJ1 553 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 CRYBG2Q8N1P7 616 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 RNPEPL1Q9HAU8 725 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 PCDHB11Q9Y5F2 797 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 AGXTP21549 392 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 KCNA5P22460 613 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 ARFIP1P53367 373 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 C1QTNF8P60827 252 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 GDPD4Q6W3E5 623 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 RASSF5Q8WWW0 418 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 SLC38A4Q969I6 547 aa18.73■□□□□ 0.59
SMPD3-201ENST00000219334 APOBEC3GQ9HC16 384 aaKnown RBP18.73■□□□□ 0.59
SMPD3-201ENST00000219334 ZNF536O15090 1300 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 G3V2T6 193 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 CD48P09326 243 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 NDUFA5Q16718 116 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 FAM92BQ6ZTR7 304 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 RTKNQ9BST9 563 aa18.72■□□□□ 0.59
SMPD3-201ENST00000219334 GTPBP2Q9BX10 602 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 340.3 ms