RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 SMYD1Q8NB12 490 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 TBC1D15Q8TC07 691 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 LINGO1Q96FE5 620 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 PFDN4Q9NQP4 134 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 CHCHD3Q9NX63 227 aaKnown RBP17.07■□□□□ 0.32
USB1-201ENST00000219281 TRMT6Q9UJA5 497 aaKnown RBP17.07■□□□□ 0.32
USB1-201ENST00000219281 PRG3Q9Y2Y8 225 aaPredicted RBP17.07■□□□□ 0.32
USB1-201ENST00000219281 PCDHGA11Q9Y5H2 935 aa17.07■□□□□ 0.32
USB1-201ENST00000219281 H0YAE9 185 aa17.06■□□□□ 0.32
USB1-201ENST00000219281 PCNAP12004 261 aa17.06■□□□□ 0.32
USB1-201ENST00000219281 PKMP14618 531 aaKnown RBP17.06■□□□□ 0.32
USB1-201ENST00000219281 OR1G1P47890 313 aa17.06■□□□□ 0.32
USB1-201ENST00000219281 ERVPABLB-1P60509 514 aa17.06■□□□□ 0.32
USB1-201ENST00000219281 PLIN5Q00G26 463 aa17.06■□□□□ 0.32
USB1-201ENST00000219281 TAF1AQ15573 450 aaPredicted RBP17.06■□□□□ 0.32
USB1-201ENST00000219281 GLB1LQ6UWU2 654 aa17.06■□□□□ 0.32
USB1-201ENST00000219281 DLEU7Q6UYE1 221 aa17.06■□□□□ 0.32
USB1-201ENST00000219281 ITIH5Q86UX2 942 aa17.06■□□□□ 0.32
USB1-201ENST00000219281 SFRP1Q8N474 314 aa17.06■□□□□ 0.32
USB1-201ENST00000219281 DTWD1Q8N5C7 304 aa17.06■□□□□ 0.32
USB1-201ENST00000219281 TERB1Q8NA31 727 aa17.06■□□□□ 0.32
USB1-201ENST00000219281 B3GALT6Q96L58 329 aa17.06■□□□□ 0.32
USB1-201ENST00000219281 HBEGFQ99075 208 aa17.06■□□□□ 0.32
USB1-201ENST00000219281 MGME1Q9BQP7 344 aa17.06■□□□□ 0.32
USB1-201ENST00000219281 SARS2Q9NP81 518 aaKnown RBP17.06■□□□□ 0.32
USB1-201ENST00000219281 OLA1Q9NTK5 396 aaKnown RBP17.06■□□□□ 0.32
USB1-201ENST00000219281 FAIMQ9NVQ4 179 aa17.06■□□□□ 0.32
USB1-201ENST00000219281 SLC27A5Q9Y2P5 690 aa17.06■□□□□ 0.32
USB1-201ENST00000219281 PCDHB3Q9Y5E6 796 aa17.06■□□□□ 0.32
USB1-201ENST00000219281 MAGED1Q9Y5V3 778 aaPredicted RBP17.06■□□□□ 0.32
USB1-201ENST00000219281 DYTNA2CJ06 578 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 C2orf81A6NN90 581 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 NPPAP01160 153 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 MATN1P21941 496 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 HOXD9P28356 352 aaPredicted RBP17.05■□□□□ 0.32
USB1-201ENST00000219281 SHMT2P34897 504 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 ARPP19P56211 112 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 NAA20P61599 178 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 BNIP3Q12983 259 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 FXNQ16595 210 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 AAK1Q2M2I8 961 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 PLA2G4EQ3MJ16 856 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 CTSL3PQ5NE16 218 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 GIPC3Q8TF64 312 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 TMBIM1Q969X1 311 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 SPON2Q9BUD6 331 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 CINPQ9BW66 212 aaPredicted RBP17.05■□□□□ 0.32
USB1-201ENST00000219281 TLR8Q9NR97 1041 aaKnown RBP17.05■□□□□ 0.32
USB1-201ENST00000219281 IL37Q9NZH6 218 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 FKBPLQ9UIM3 349 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 MAGEL2Q9UJ55 1249 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 UPK1AO00322 258 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 IGLV3-27P01718 113 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 G6PDP11413 515 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 HTR6P50406 440 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 KCNQ1P51787 676 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 ARSFP54793 590 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 IL2P60568 153 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 ALG1LQ6GMV1 187 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 FAM117BQ6P1L5 589 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 LETMD1Q6P1Q0 360 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 LEMD2Q8NC56 503 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 ITFG1Q8TB96 612 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 PPP1R14BQ96C90 147 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 CCSER2Q9H7U1 834 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 FANCEQ9HB96 536 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 BPIFA1Q9NP55 256 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 TSR3Q9UJK0 312 aaKnown RBP17.05■□□□□ 0.32
USB1-201ENST00000219281 ANKRD36A6QL64 1941 aa17.05■□□□□ 0.32
USB1-201ENST00000219281 MOXD2PA6NHM9 499 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 TCF3P15923 654 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 MC4RP32245 332 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 ALDH3A2P51648 485 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 DGKQP52824 942 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 PTPRRQ15256 657 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 C18orf21Q32NC0 220 aaPredicted RBP17.04■□□□□ 0.32
USB1-201ENST00000219281 ZNF773Q6PK81 442 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 IL27RAQ6UWB1 636 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 STK32CQ86UX6 486 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 CLEC4FQ8N1N0 589 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 DPP10Q8N608 796 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 SLC43A3Q8NBI5 491 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 LPCAT1Q8NF37 534 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 CD200R1Q8TD46 325 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 ZNF382Q96SR6 550 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 TUBA1CQ9BQE3 449 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 TBC1D23Q9NUY8 699 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 SEPT3Q9UH03 358 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 F5H5T6 163 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 INSIG1O15503 277 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 NOL3O60936 208 aaKnown RBP17.04■□□□□ 0.32
USB1-201ENST00000219281 PRLP01236 227 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 CAPN1P07384 714 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 NFKBIAP25963 317 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 GNA12Q03113 381 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 CRY1Q16526 586 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 ZRANB3Q5FWF4 1079 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 VARS2Q5ST30 1063 aaKnown RBP17.04■□□□□ 0.32
USB1-201ENST00000219281 ANKRD26P1Q6NSI1 321 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 ZBTB46Q86UZ6 589 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms