RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 MAFKO60675 156 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 ITGA2P17301 1181 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 POLR2EP19388 210 aaKnown RBP8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 CRATP43155 626 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 GALK1P51570 392 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 KCTD21Q4G0X4 260 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 SETMARQ53H47 684 aaPredicted RBP8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 NAPRTQ6XQN6 538 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 CCDC149Q6ZUS6 474 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 C11orf96Q7Z7L8 435 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 SERPINA9Q86WD7 417 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 TP53INP2Q8IXH6 220 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 OFCC1Q8IZS5 231 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 PDPRQ8NCN5 879 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 TRPV3Q8NET8 790 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 DNAJB8Q8NHS0 232 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 GIPC3Q8TF64 312 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 UBE2E3Q969T4 207 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 ESAMQ96AP7 390 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 IMP4Q96G21 291 aaKnown RBP8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 SORT1Q99523 831 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 GALNT8Q9NY28 637 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 SNX8Q9Y5X2 465 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 A0A1W2PP18 115 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 SYNDIG1LA6NDD5 238 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 TRIM24O15164 1050 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 SH3BGRLO75368 114 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 PRPS2P11908 318 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 WEE1P30291 646 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 GRK3P35626 688 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 IDH2P48735 452 aaKnown RBP8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 TUBA4AP68366 448 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 NRG1Q02297 640 aaPredicted RBP8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 SERINC3Q13530 473 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 CEACAM7Q14002 265 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 SPIDRQ14159 915 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 CCDC85BQ15834 202 aaPredicted RBP8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 OGFRL1Q5TC84 451 aaPredicted RBP8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 ANXA8L1Q5VT79 327 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 CEP97Q8IW35 865 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 TTC30BQ8N4P2 665 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 ARL10Q8N8L6 244 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 CLHC1Q8NHS4 586 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 OLIG1Q8TAK6 271 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 TSPEARQ8WU66 669 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 EZH1Q92800 747 aaPredicted RBP8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 CLP1Q92989 425 aaKnown RBP8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 ZUFSPQ96AP4 578 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 ZNF778Q96MU6 729 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 RANBP9Q96S59 729 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 HBEGFQ99075 208 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 YTHDF1Q9BYJ9 559 aaKnown RBP8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 KRT84Q9NSB2 600 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 KLHL3Q9UH77 587 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 EVLQ9UI08 416 aaPredicted RBP8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 OAZ3Q9UMX2 235 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 ILVBLA1L0T0 632 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 LRATO95237 230 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 PABPC4LP0CB38 370 aaKnown RBP8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 RPIAP49247 311 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 CREMQ03060 361 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 NCF4Q15080 339 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 CYP2A13Q16696 494 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 PM20D1Q6GTS8 502 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 TMEM214Q6NUQ4 689 aaKnown RBP8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 CASP12Q6UXS9 341 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 ERI1Q8IV48 349 aaKnown RBP8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 DEPDC4Q8N2C3 294 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 AMER2Q8N7J2 671 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 GRIN3AQ8TCU5 1115 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 MYDGFQ969H8 173 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 APOLD1Q96LR9 279 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 MTIF3Q9H2K0 278 aaKnown RBP8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 BRD9Q9H8M2 597 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 MEAF6Q9HAF1 191 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 PCDH12Q9NPG4 1184 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 DNAJC11Q9NVH1 559 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 PTBP2Q9UKA9 531 aaKnown RBP8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 KCNE2Q9Y6J6 123 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 PTGESO14684 152 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 NIPSNAP2O75323 286 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 CDH1P12830 882 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 CD68P34810 354 aaPredicted RBP8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 ACVRL1P37023 503 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 GSK3BP49841 420 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 USP46P62068 366 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 ZNF846Q147U1 533 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 ZBTB6Q15916 424 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 CCDC142Q17RM4 750 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 ARMCX4Q5H9R4 360 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 SPANXN2Q5MJ10 180 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 BEND5Q7L4P6 421 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 KBTBD6Q86V97 674 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 OR10A6Q8NH74 314 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 CSGALNACT1Q8TDX6 532 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 TIFAQ96CG3 184 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 SYT17Q9BSW7 474 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 DNAJB9Q9UBS3 223 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 IKZF3Q9UKT9 509 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms