RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 KAZNQ674X7 775 aa7.74□□□□□ -1.17
PNKP-229ENST00000637897 CHST15Q7LFX5 561 aaPredicted RBP7.74□□□□□ -1.17
PNKP-229ENST00000637897 ARHGAP22Q7Z5H3 698 aa7.74□□□□□ -1.17
PNKP-229ENST00000637897 VASH2Q86V25 355 aa7.74□□□□□ -1.17
PNKP-229ENST00000637897 KATNAL2Q8IYT4 538 aa7.74□□□□□ -1.17
PNKP-229ENST00000637897 PAF1Q8N7H5 531 aa7.74□□□□□ -1.17
PNKP-229ENST00000637897 CAVIN3Q969G5 261 aa7.74□□□□□ -1.17
PNKP-229ENST00000637897 TMEM74Q96NL1 305 aa7.74□□□□□ -1.17
PNKP-229ENST00000637897 PLEKHG4BQ96PX9 1271 aa7.74□□□□□ -1.17
PNKP-229ENST00000637897 FAM118BQ9BPY3 351 aa7.74□□□□□ -1.17
PNKP-229ENST00000637897 TBC1D10AQ9BXI6 508 aa7.74□□□□□ -1.17
PNKP-229ENST00000637897 RAB17Q9H0T7 212 aa7.74□□□□□ -1.17
PNKP-229ENST00000637897 OR2AG1Q9H205 316 aa7.74□□□□□ -1.17
PNKP-229ENST00000637897 ZFYVE1Q9HBF4 777 aa7.74□□□□□ -1.17
PNKP-229ENST00000637897 BPIFA1Q9NP55 256 aa7.74□□□□□ -1.17
PNKP-229ENST00000637897 IL26Q9NPH9 171 aa7.74□□□□□ -1.17
PNKP-229ENST00000637897 IL17CQ9P0M4 197 aa7.74□□□□□ -1.17
PNKP-229ENST00000637897 SEPT10Q9P0V9 454 aa7.74□□□□□ -1.17
PNKP-229ENST00000637897 WDR37Q9Y2I8 494 aa7.74□□□□□ -1.17
PNKP-229ENST00000637897 UTP11Q9Y3A2 253 aaKnown RBP7.74□□□□□ -1.17
PNKP-229ENST00000637897 SLC30A1Q9Y6M5 507 aa7.74□□□□□ -1.17
PNKP-229ENST00000637897 RGSL1A5PLK6 1076 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.73□□□□□ -1.17
PNKP-229ENST00000637897 BHMG1C9JSJ3 638 aaPredicted RBP7.73□□□□□ -1.17
PNKP-229ENST00000637897 TK2O00142 265 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 GRID2O43424 1007 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 BUD23O43709 281 aaKnown RBP7.73□□□□□ -1.17
PNKP-229ENST00000637897 UGT1A9O60656 530 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 PHF2O75151 1096 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 ASMTLO95671 621 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 NDST3O95803 873 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 PYGMP11217 842 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 ITGB6P18564 788 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 UGT1A6P19224 532 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 UGT1A1P22309 533 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 UGT1A4P22310 534 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 RBL1P28749 1068 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 ADRA1AP35348 466 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 UGT1A3P35503 534 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 CLCNKAP51800 687 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 CTSCP53634 463 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 MAPK10P53779 464 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 TMPRSS3P57727 454 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 CYP4F2P78329 520 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 CBX1P83916 185 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 EIF3IQ13347 325 aaKnown RBP7.73□□□□□ -1.17
PNKP-229ENST00000637897 CLCA4Q14CN2 919 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 CYP1B1Q16678 543 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 HSP90B2PQ58FF3 399 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 PHF19Q5T6S3 580 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 DENND5AQ6IQ26 1287 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 FAM83HQ6ZRV2 1179 aaPredicted RBP7.73□□□□□ -1.17
PNKP-229ENST00000637897 BBS12Q6ZW61 710 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 TIPARPQ7Z3E1 657 aaKnown RBP7.73□□□□□ -1.17
PNKP-229ENST00000637897 PIM3Q86V86 326 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 ZC3H18Q86VM9 953 aaKnown RBP7.73□□□□□ -1.17
PNKP-229ENST00000637897 SLC13A5Q86YT5 568 aaPredicted RBP7.73□□□□□ -1.17
PNKP-229ENST00000637897 GALNT13Q8IUC8 556 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 KLHDC8BQ8IXV7 354 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 TRAM1L1Q8N609 369 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 OR4D9Q8NGE8 314 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 JPH3Q8WXH2 748 aaPredicted RBP7.73□□□□□ -1.17
PNKP-229ENST00000637897 GLYATL1Q969I3 302 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 RNF31Q96EP0 1072 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 QKIQ96PU8 341 aaKnown RBP eCLIP7.73□□□□□ -1.17
PNKP-229ENST00000637897 FCRL5Q96RD9 977 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 NRTNQ99748 197 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 HEMGNQ9BXL5 484 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 DDX47Q9H0S4 455 aaKnown RBP7.73□□□□□ -1.17
PNKP-229ENST00000637897 CDH19Q9H159 772 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 UGT1A7Q9HAW7 530 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 UGT1A10Q9HAW8 530 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 UGT1A8Q9HAW9 530 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 TRIM39Q9HCM9 518 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 APMAPQ9HDC9 416 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 SARS2Q9NP81 518 aaKnown RBP7.73□□□□□ -1.17
PNKP-229ENST00000637897 MED4Q9NPJ6 270 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 FAM114A2Q9NRY5 505 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 HOMER3Q9NSC5 361 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 DDX56Q9NY93 547 aaKnown RBP7.73□□□□□ -1.17
PNKP-229ENST00000637897 PCYOX1Q9UHG3 505 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 ZNHIT2Q9UHR6 403 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 KCTD3Q9Y597 815 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 B3GALT1Q9Y5Z6 326 aa7.73□□□□□ -1.17
PNKP-229ENST00000637897 ZNF106Q9H2Y7 1883 aaKnown RBP7.72□□□□□ -1.17
PNKP-229ENST00000637897 RELNP78509 3460 aa7.72□□□□□ -1.17
PNKP-229ENST00000637897 SPTBP11277 2137 aa7.72□□□□□ -1.17
PNKP-229ENST00000637897 TCRBV7S2A1N4TA0A589 114 aa7.72□□□□□ -1.17
PNKP-229ENST00000637897 RHPN2P1A8MT19 583 aa7.72□□□□□ -1.17
PNKP-229ENST00000637897 ERVH48-1M5A8F1 160 aa7.72□□□□□ -1.17
PNKP-229ENST00000637897 PPP1R12AO14974 1030 aaPredicted RBP7.72□□□□□ -1.17
PNKP-229ENST00000637897 AGTP01019 485 aa7.72□□□□□ -1.17
PNKP-229ENST00000637897 SLC4A1P02730 911 aa7.72□□□□□ -1.17
PNKP-229ENST00000637897 MYBL2P10244 700 aa7.72□□□□□ -1.17
PNKP-229ENST00000637897 LIPCP11150 499 aa7.72□□□□□ -1.17
PNKP-229ENST00000637897 F3P13726 295 aa7.72□□□□□ -1.17
PNKP-229ENST00000637897 HMGCLP35914 325 aa7.72□□□□□ -1.17
PNKP-229ENST00000637897 NR2C2P49116 596 aa7.72□□□□□ -1.17
PNKP-229ENST00000637897 FNTAP49354 379 aa7.72□□□□□ -1.17
PNKP-229ENST00000637897 CARSP49589 748 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms