RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 CNBD1Q8NA66 436 aa5.06□□□□□ -1.6
TRAPPC9-216ENST00000634178 PTPMT1Q8WUK0 201 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC9-216ENST00000634178 PTERQ96BW5 349 aa5.06□□□□□ -1.6
TRAPPC9-216ENST00000634178 SPAG5Q96R06 1193 aa5.06□□□□□ -1.6
TRAPPC9-216ENST00000634178 TESK2Q96S53 571 aa5.06□□□□□ -1.6
TRAPPC9-216ENST00000634178 GAD1Q99259 594 aa5.06□□□□□ -1.6
TRAPPC9-216ENST00000634178 MMTAG2Q9BU76 263 aaKnown RBP5.06□□□□□ -1.6
TRAPPC9-216ENST00000634178 RTN4RQ9BZR6 473 aa5.06□□□□□ -1.6
TRAPPC9-216ENST00000634178 MAGIXQ9H6Y5 334 aa5.06□□□□□ -1.6
TRAPPC9-216ENST00000634178 HINT3Q9NQE9 182 aaKnown RBP5.06□□□□□ -1.6
TRAPPC9-216ENST00000634178 PDGFCQ9NRA1 345 aa5.06□□□□□ -1.6
TRAPPC9-216ENST00000634178 MRGBPQ9NV56 204 aa5.06□□□□□ -1.6
TRAPPC9-216ENST00000634178 RNF186Q9NXI6 227 aa5.06□□□□□ -1.6
TRAPPC9-216ENST00000634178 OSGIN1Q9UJX0 560 aa5.06□□□□□ -1.6
TRAPPC9-216ENST00000634178 PLAGL1Q9UM63 463 aa5.06□□□□□ -1.6
TRAPPC9-216ENST00000634178 ZNF148Q9UQR1 794 aa5.06□□□□□ -1.6
TRAPPC9-216ENST00000634178 PAM16Q9Y3D7 125 aa5.06□□□□□ -1.6
TRAPPC9-216ENST00000634178 SRPRBQ9Y5M8 271 aaKnown RBP5.06□□□□□ -1.6
TRAPPC9-216ENST00000634178 RANBP2P49792 3224 aaKnown RBP5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 LOC102723996A0A087X1L8 192 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 GPR75-ASB3A0A0A6YYF3 556 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 LNP1A1A4G5 178 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 C1orf226A1L170 272 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 MDM4O15151 490 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 WDR46O15213 610 aaKnown RBP5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 LATS1O95835 1130 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 IFNA2P01563 188 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 MMP9P14780 707 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 GJA1P17302 382 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 CPT2P23786 658 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 ALDH1B1P30837 517 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 NHLH1Q02575 133 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 GRSF1Q12849 480 aaKnown RBP eCLIP5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 BFSP1Q12934 665 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 CCDC184Q52MB2 194 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 ZNF628Q5EBL2 1059 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 EPHA10Q5JZY3 1008 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 PAPD7Q5XG87 772 aaKnown RBP5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 NUGGCQ68CJ6 796 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 RGMBQ6NW40 437 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 ZNF530Q6P9A1 599 aaPredicted RBP5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 C11orf88Q6PI97 169 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 ZNF782Q6ZMW2 699 aaPredicted RBP5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 ZNF788Q6ZQV5 615 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 TRAPPC11Q7Z392 1133 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 OR6J1Q8NGC5 347 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 MPLKIPQ8TAP9 179 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 TMEM174Q8WUU8 243 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 DACH2Q96NX9 599 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 GRPEL1Q9HAV7 217 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 EPB41L5Q9HCM4 733 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 DDX4Q9NQI0 724 aaKnown RBP5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 GDE1Q9NZC3 331 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 SELENONQ9NZV5 590 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 DDX25Q9UHL0 483 aaKnown RBP5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 RASAL2Q9UJF2 1139 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 RCOR1Q9UKL0 485 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 GTF3C4Q9UKN8 822 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 TTC7AQ9ULT0 858 aaPredicted RBP5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 STON1Q9Y6Q2 735 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 COL4A5P29400 1685 aa5.05□□□□□ -1.6
TRAPPC9-216ENST00000634178 TRIOBPQ9H2D6 2365 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 MANSC4A6NHS7 340 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 LRRC3CA6NJW4 275 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 H3BQ06 376 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 VCYO14598 125 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 MAP2K7O14733 419 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 ATP2A1O14983 1001 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 SMAD9O15198 467 aaKnown RBP5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 TLR2O60603 784 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 CNOT3O75175 753 aaKnown RBP5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 BCAR3O75815 825 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 VPREB1P12018 145 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 CHRNB2P17787 502 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 ERCC2P18074 760 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 MCCP23508 829 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 GDF5P43026 501 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 PPP3CCP48454 512 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 RASSF2P50749 326 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 CCR3P51677 355 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 CSE1LP55060 971 aaKnown RBP5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 HUNKP57058 714 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 RBP5P82980 135 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 ADORA2A-AS1P86434 159 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 PLIN5Q00G26 463 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 KRTAP1-1Q07627 177 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 SREBF2Q12772 1141 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 FHL2Q14192 279 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 KRT33BQ14525 404 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 INPP5JQ15735 1006 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 C2orf68Q2NKX9 166 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 Q5PR19 223 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 DENND5BQ6ZUT9 1274 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 TAOK1Q7L7X3 1001 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 PLPPR4Q7Z2D5 763 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 METTL23Q86XA0 190 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 CNGA4Q8IV77 575 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 MMP21Q8N119 569 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 SPATA6LQ8N4H0 392 aa5.04□□□□□ -1.6
TRAPPC9-216ENST00000634178 TTC30BQ8N4P2 665 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms