RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 STN1Q9H668 368 aaKnown RBP12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 ARMCX1Q9P291 453 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 SLC2A6Q9UGQ3 507 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 SOX13Q9UN79 622 aa12.34□□□□□ -0.43
SYNGAP1-207ENST00000628646 TCF20Q9UGU0 1960 aaKnown RBP12.33□□□□□ -0.43
SYNGAP1-207ENST00000628646 CCDC162PA2VCL2 907 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 TPP1O14773 563 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 SMIM24O75264 130 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 USP1O94782 785 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 ITGA2BP08514 1039 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 C6P13671 934 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 POLD2P49005 469 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 FRG1Q14331 258 aaKnown RBP12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 PLCL1Q15111 1095 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 TRIM74Q86UV6 250 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 LCA5Q86VQ0 697 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 SYNPOQ8N3V7 929 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 SPEM1Q8N4L4 309 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 CCNYL1Q8N7R7 359 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 TMIEQ8NEW7 156 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 CDKN2AIPNLQ96HQ2 116 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 PANX3Q96QZ0 392 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 EBF4Q9BQW3 602 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 GPAMQ9HCL2 828 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 SLC2A4RGQ9NR83 387 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 LRRC42Q9Y546 428 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 A0A096LPK6 155 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 GREM1O60565 184 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 STX1BP61266 288 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 KIAA1211LQ6NV74 962 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 C16orf46Q6P387 395 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 ZCCHC23Q6ZST2 131 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 SERPINA9Q86WD7 417 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 SGF29Q96ES7 293 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 SCRN2Q96FV2 425 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 CPEB1Q9BZB8 566 aaKnown RBP12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 OR2AG1Q9H205 316 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 KCTD5Q9NXV2 234 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 TAS2R13Q9NYV9 303 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 TRBV23OR9-2A0A075B6M9 112 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 TMEM221A6NGB7 291 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 M0R296 226 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 PLIN3O60664 434 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 GFAPP14136 432 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 MAOBP27338 520 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 CACNG1Q06432 222 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 RBFAQ8N0V3 343 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 WDR60Q8WVS4 1066 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 ARRDC3Q96B67 414 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 CASS4Q9NQ75 786 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 NDE1Q9NXR1 346 aa12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 UTP6Q9NYH9 597 aaKnown RBP12.33□□□□□ -0.44
SYNGAP1-207ENST00000628646 NPIPB15A6NHN6 443 aaPredicted RBP12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 PROCP04070 461 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 F7P08709 466 aaPredicted RBP12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 C9orf64Q5T6V5 341 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 CHST15Q7LFX5 561 aaPredicted RBP12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 TMEM151AQ8N4L1 468 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 RAB42Q8N4Z0 105 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 KCNV2Q8TDN2 545 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 ULK4Q96C45 1275 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 CMTM5Q96DZ9 223 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 HSPA12BQ96MM6 686 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 DNAJC28Q9NX36 388 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 EIF2B4Q9UI10 523 aaKnown RBP12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 FAM86C2PA6NEL3 165 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 TRIM13O60858 407 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 TIMP2P16035 220 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 HALP42357 657 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 PLXNA3P51805 1871 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 PTPRRQ15256 657 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 PPM1JQ5JR12 505 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 CLEC14AQ86T13 490 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 GALNT13Q8IUC8 556 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 SLC17A9Q9BYT1 436 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 MAGEE1Q9HCI5 957 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 CPSF2Q9P2I0 782 aaKnown RBP12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 STOML1Q9UBI4 398 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 CAPN8A6NHC0 703 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 CHURC1-FNTBB4DL54 471 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 PRMT5O14744 637 aaPredicted RBP12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 MAGEC1O60732 1142 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 RBP1P09455 135 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 CHRM1P11229 460 aaPredicted RBP12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 ALOX15P16050 662 aaPredicted RBP12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 NDUFV2P19404 249 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 GCKP35557 465 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 MAPK9P45984 424 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 FNTBP49356 437 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 ZXDAP98168 799 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 ACSBG2Q5FVE4 666 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 RAVER1Q8IY67 606 aaKnown RBP12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 FAM160A2Q8N612 972 aaPredicted RBP12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 ACVR1CQ8NER5 493 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 NRG4Q8WWG1 115 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 KLHDC7BQ96G42 594 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 FAR2Q96K12 515 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 ANGPTL2Q9UKU9 493 aa12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 MTF2Q9Y483 593 aaPredicted RBP12.32□□□□□ -0.44
SYNGAP1-207ENST00000628646 WASF2Q9Y6W5 498 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms