RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 PTPN7P35236 360 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 ADCY8P40145 1251 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 POLD2P49005 469 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 SPINT3P49223 89 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 GEMP55040 296 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 EIF3EP60228 445 aaKnown RBP6.34□□□□□ -1.39
TCF4-249ENST00000625716 OTUD4Q01804 1114 aaKnown RBP6.34□□□□□ -1.39
TCF4-249ENST00000625716 ADCY2Q08462 1091 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 WASHC5Q12768 1159 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 MPP3Q13368 585 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 IHHQ14623 411 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 RTP5Q14D33 572 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 C14orf28Q4W4Y0 310 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 ZNF569Q5MCW4 686 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 CDCP2Q5VXM1 449 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 ALS2CLQ60I27 953 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 SLC30A9Q6PML9 568 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 RFLNAQ6ZTI6 216 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 ZAR1Q86SH2 424 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 LSMEM2Q8N112 164 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 ZNF567Q8N184 647 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 PELI3Q8N2H9 469 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 SLC25A41Q8N5S1 370 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 RNF10Q8N5U6 811 aaKnown RBP6.34□□□□□ -1.39
TCF4-249ENST00000625716 Q8N9G6 341 aaPredicted RBP6.34□□□□□ -1.39
TCF4-249ENST00000625716 CCDC112Q8NEF3 446 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 IPMKQ8NFU5 416 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 CCL4L1Q8NHW4 92 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 GDAP1Q8TB36 358 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 GPBAR1Q8TDU6 330 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 UBE2Q2Q8WVN8 375 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 CCDC74AQ96AQ1 378 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 PPP1R2P1Q96PQ5 205 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 OR2M4Q96R27 311 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 FCRL5Q96RD9 977 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 GFM1Q96RP9 751 aaKnown RBP6.34□□□□□ -1.39
TCF4-249ENST00000625716 DESI2Q9BSY9 194 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 ZSCAN5AQ9BUG6 496 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 FRMD8Q9BZ67 464 aaPredicted RBP6.34□□□□□ -1.39
TCF4-249ENST00000625716 STRADBQ9C0K7 418 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 TRABDQ9H4I3 376 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 STN1Q9H668 368 aaKnown RBP6.34□□□□□ -1.39
TCF4-249ENST00000625716 HACD3Q9P035 362 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 VPS18Q9P253 973 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 LRIT1Q9P2V4 623 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 DKK4Q9UBT3 224 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 AAR2Q9Y312 384 aaKnown RBP6.34□□□□□ -1.39
TCF4-249ENST00000625716 REXO2Q9Y3B8 237 aaKnown RBP6.34□□□□□ -1.39
TCF4-249ENST00000625716 ZNF711Q9Y462 761 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 ACTL7BQ9Y614 415 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 U3KQA8 63 aa6.34□□□□□ -1.39
TCF4-249ENST00000625716 TP53BP1Q12888 1972 aaPredicted RBP6.34□□□□□ -1.39
TCF4-249ENST00000625716 DOCK9Q9BZ29 2069 aa6.34□□□□□ -1.4
TCF4-249ENST00000625716 KCNN4O15554 427 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 ARHGAP6O43182 974 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 NUDT21O43809 227 aaKnown RBP6.33□□□□□ -1.4
TCF4-249ENST00000625716 SLC25A14O95258 325 aaPredicted RBP6.33□□□□□ -1.4
TCF4-249ENST00000625716 FTCDO95954 541 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 EPOP01588 193 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 ATP1A1P05023 1023 aaKnown RBP6.33□□□□□ -1.4
TCF4-249ENST00000625716 RPLP0P05388 317 aaKnown RBP6.33□□□□□ -1.4
TCF4-249ENST00000625716 RBP3P10745 1247 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 PYGMP11217 842 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 SLC2A4P14672 509 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 PNLIPP16233 465 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 HLA-DPA1P20036 260 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 AK4P27144 223 aaPredicted RBP6.33□□□□□ -1.4
TCF4-249ENST00000625716 RBMS1P29558 406 aaKnown RBP6.33□□□□□ -1.4
TCF4-249ENST00000625716 ALDH4A1P30038 563 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 ACTR1BP42025 376 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 SERPINB4P48594 390 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 WNT3AP56704 352 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 ACTR1AP61163 376 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 GABREP78334 506 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 GTF2H3Q13889 308 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 NOMO1Q15155 1222 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 ISXQ2M1V0 245 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 PYCR3Q53H96 274 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 SIRPB2Q5JXA9 342 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 ANKRD20A2Q5SQ80 823 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 FAM182AQ5T1J6 154 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 HENMT1Q5T8I9 393 aaKnown RBP6.33□□□□□ -1.4
TCF4-249ENST00000625716 SEL1L2Q5TEA6 688 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 ANKRD20A1Q5TYW2 823 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 ANKRD20A3Q5VUR7 823 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 ZDHHC20Q5W0Z9 365 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 KCTD16Q68DU8 428 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 PDPK2PQ6A1A2 396 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 OGFOD3Q6PK18 319 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 PAOXQ6QHF9 649 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 ARHGEF18Q6ZSZ5 1173 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 CHST15Q7LFX5 561 aaPredicted RBP6.33□□□□□ -1.4
TCF4-249ENST00000625716 GLT6D1Q7Z4J2 308 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 TMC3Q7Z5M5 1100 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 TRIM74Q86UV6 250 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 PHYKPLQ8IUZ5 450 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 TMEM139Q8IV31 216 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 TRAM1L1Q8N609 369 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 LRRC57Q8N9N7 239 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 GPR156Q8NFN8 814 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms