RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 WDR24Q96S15 920 aa13.59□□□□□ -0.23
SNX1-214ENST00000625244 ARFGAP3Q9NP61 516 aa13.59□□□□□ -0.23
SNX1-214ENST00000625244 PCMTD2Q9NV79 361 aa13.59□□□□□ -0.23
SNX1-214ENST00000625244 ATXN10Q9UBB4 475 aa13.59□□□□□ -0.23
SNX1-214ENST00000625244 SUCOQ9UBS9 1254 aaKnown RBP13.59□□□□□ -0.23
SNX1-214ENST00000625244 ADGRG1Q9Y653 693 aa13.59□□□□□ -0.23
SNX1-214ENST00000625244 NBEAL1Q6ZS30 2694 aa13.58□□□□□ -0.23
SNX1-214ENST00000625244 PDZK1P1A8MUH7 402 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 DFFAO00273 331 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 KLHL41O60662 606 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 LCA5LO95447 670 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 MMEP08473 750 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 PDHA1P08559 390 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 RPL10P27635 214 aaKnown RBP13.58□□□□□ -0.24
SNX1-214ENST00000625244 RFC1P35251 1148 aaPredicted RBP13.58□□□□□ -0.24
SNX1-214ENST00000625244 KIR3DL1P43629 444 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 STC1P52823 247 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 ART1P52961 327 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 TPI1P60174 286 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 OTUD4Q01804 1114 aaKnown RBP13.58□□□□□ -0.24
SNX1-214ENST00000625244 TLE4Q04727 773 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 IL10RBQ08334 325 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 CAMK4Q16566 473 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 PTCHD3Q3KNS1 767 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 PLA2G4EQ3MJ16 856 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 SMYD5Q6GMV2 418 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 NOP9Q86U38 636 aaKnown RBP13.58□□□□□ -0.24
SNX1-214ENST00000625244 KMT5CQ86Y97 462 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 SYTL1Q8IYJ3 562 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 DNAJB14Q8TBM8 379 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 PPP4R1Q8TF05 950 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 CPT1BQ92523 772 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 CLIP3Q96DZ5 547 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 NUDCD1Q96RS6 583 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 CARD9Q9H257 536 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 CLSTN2Q9H4D0 955 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 MCCC2Q9HCC0 563 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 FAM207AQ9NSI2 230 aaPredicted RBP13.58□□□□□ -0.24
SNX1-214ENST00000625244 CTNND2Q9UQB3 1225 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 DNAJC16Q9Y2G8 782 aa13.58□□□□□ -0.24
SNX1-214ENST00000625244 PRRC2AP48634 2157 aaKnown RBP13.58□□□□□ -0.24
SNX1-214ENST00000625244 STAB1Q9NY15 2570 aa13.57□□□□□ -0.24
SNX1-214ENST00000625244 TRGV8A0A0C4DH27 118 aa13.57□□□□□ -0.24
SNX1-214ENST00000625244 CCL21O00585 134 aa13.57□□□□□ -0.24
SNX1-214ENST00000625244 DDX3YO15523 660 aaKnown RBP13.57□□□□□ -0.24
SNX1-214ENST00000625244 KLF7O75840 302 aaPredicted RBP13.57□□□□□ -0.24
SNX1-214ENST00000625244 SOX8P57073 446 aa13.57□□□□□ -0.24
SNX1-214ENST00000625244 ZNF169Q14929 603 aaPredicted RBP13.57□□□□□ -0.24
SNX1-214ENST00000625244 ARMC12Q5T9G4 340 aa13.57□□□□□ -0.24
SNX1-214ENST00000625244 CRTC3Q6UUV7 619 aa13.57□□□□□ -0.24
SNX1-214ENST00000625244 RPTNQ6XPR3 784 aa13.57□□□□□ -0.24
SNX1-214ENST00000625244 TRIM72Q6ZMU5 477 aa13.57□□□□□ -0.24
SNX1-214ENST00000625244 RBM12BQ8IXT5 1001 aaKnown RBP13.57□□□□□ -0.24
SNX1-214ENST00000625244 NPWQ8N729 165 aa13.57□□□□□ -0.24
SNX1-214ENST00000625244 OR8K5Q8NH50 307 aa13.57□□□□□ -0.24
SNX1-214ENST00000625244 OR2AG1Q9H205 316 aa13.57□□□□□ -0.24
SNX1-214ENST00000625244 GSX1Q9H4S2 264 aaPredicted RBP13.57□□□□□ -0.24
SNX1-214ENST00000625244 OLAHQ9NV23 265 aa13.57□□□□□ -0.24
SNX1-214ENST00000625244 FLNAP21333 2647 aaKnown RBP13.57□□□□□ -0.24
SNX1-214ENST00000625244 NSD1Q96L73 2696 aaPredicted RBP13.57□□□□□ -0.24
SNX1-214ENST00000625244 CCDC78A2IDD5 438 aa13.56□□□□□ -0.24
SNX1-214ENST00000625244 PCDH17O14917 1159 aa13.56□□□□□ -0.24
SNX1-214ENST00000625244 CCP110O43303 1012 aa13.56□□□□□ -0.24
SNX1-214ENST00000625244 LDB2O43679 373 aa13.56□□□□□ -0.24
SNX1-214ENST00000625244 GPD1P21695 349 aa13.56□□□□□ -0.24
SNX1-214ENST00000625244 MMP8P22894 467 aa13.56□□□□□ -0.24
SNX1-214ENST00000625244 TDGF1P3P51864 188 aa13.56□□□□□ -0.24
SNX1-214ENST00000625244 DRG2P55039 364 aaKnown RBP13.56□□□□□ -0.24
SNX1-214ENST00000625244 MAXP61244 160 aa13.56□□□□□ -0.24
SNX1-214ENST00000625244 TDRD12Q587J7 1177 aaKnown RBP13.56□□□□□ -0.24
SNX1-214ENST00000625244 DNTTIP2Q5QJE6 756 aaKnown RBP13.56□□□□□ -0.24
SNX1-214ENST00000625244 WDR59Q6PJI9 974 aa13.56□□□□□ -0.24
SNX1-214ENST00000625244 FAM180AQ6UWF9 173 aa13.56□□□□□ -0.24
SNX1-214ENST00000625244 ABRAXAS1Q6UWZ7 409 aa13.56□□□□□ -0.24
SNX1-214ENST00000625244 BCORP1Q8N888 145 aa13.56□□□□□ -0.24
SNX1-214ENST00000625244 CXorf40BQ96DE9 158 aa13.56□□□□□ -0.24
SNX1-214ENST00000625244 CNDP1Q96KN2 507 aa13.56□□□□□ -0.24
SNX1-214ENST00000625244 AGAP3Q96P47 875 aa13.56□□□□□ -0.24
SNX1-214ENST00000625244 IP6K3Q96PC2 410 aa13.56□□□□□ -0.24
SNX1-214ENST00000625244 C11orf70Q9BRQ4 267 aa13.56□□□□□ -0.24
SNX1-214ENST00000625244 GPATCH2LQ9NWQ4 482 aa13.56□□□□□ -0.24
SNX1-214ENST00000625244 P4HTMQ9NXG6 502 aa13.56□□□□□ -0.24
SNX1-214ENST00000625244 TRIM10Q9UDY6 481 aa13.56□□□□□ -0.24
SNX1-214ENST00000625244 COL6A5A8TX70 2615 aa13.56□□□□□ -0.24
SNX1-214ENST00000625244 UBA6A0AVT1 1052 aaPredicted RBP13.55□□□□□ -0.24
SNX1-214ENST00000625244 BICDL2A1A5D9 508 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 TLCD2A6NGC4 264 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 PEX12O00623 359 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 MTA2O94776 668 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 CLDN7O95471 211 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 PEX11BO96011 259 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 KRT3P12035 628 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 ZNF30P17039 623 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 FECHP22830 423 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 Q0VFX4 171 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 SSPNQ14714 243 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 CDSNQ15517 529 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 INSCQ1MX18 579 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 ZNF789Q5FWF6 425 aa13.55□□□□□ -0.24
SNX1-214ENST00000625244 HENMT1Q5T8I9 393 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms