RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 PRR11Q96HE9 360 aaPredicted RBP8.99□□□□□ -0.97
HDAC9-229ENST00000622668 SERPINI1Q99574 410 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 RSPH9Q9H1X1 276 aaPredicted RBP8.99□□□□□ -0.97
HDAC9-229ENST00000622668 FGFR1OP2Q9NVK5 253 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 SERTAD3Q9UJW9 196 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 SRCAPQ6ZRS2 3230 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.99□□□□□ -0.97
HDAC9-229ENST00000622668 SGTAO43765 313 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 TRIM13O60858 407 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 ULK1O75385 1050 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 KLKB1P03952 638 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 CCR2P41597 374 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 CCT8P50990 548 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 RPL26P61254 145 aaKnown RBP8.99□□□□□ -0.97
HDAC9-229ENST00000622668 CYP4F3Q08477 520 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 SEMA5AQ13591 1074 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 FAM133BQ5BKY9 247 aaKnown RBP8.99□□□□□ -0.97
HDAC9-229ENST00000622668 DNAJC14Q6Y2X3 702 aaPredicted RBP8.99□□□□□ -0.97
HDAC9-229ENST00000622668 Q6ZS52 159 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 GFM1Q96RP9 751 aaKnown RBP8.99□□□□□ -0.97
HDAC9-229ENST00000622668 AARSD1Q9BTE6 412 aaKnown RBP8.99□□□□□ -0.97
HDAC9-229ENST00000622668 DPY30Q9C005 99 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 ARRDC1-AS1Q9H2J1 176 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 MRPL46Q9H2W6 279 aaKnown RBP8.99□□□□□ -0.97
HDAC9-229ENST00000622668 ABI3Q9P2A4 366 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 SNX6Q9UNH7 406 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 RPL26L1Q9UNX3 145 aaKnown RBP8.99□□□□□ -0.97
HDAC9-229ENST00000622668 KCTD3Q9Y597 815 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 ORC6Q9Y5N6 252 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 USP3Q9Y6I4 520 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.99□□□□□ -0.97
HDAC9-229ENST00000622668 RREB1Q92766 1687 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 TIAM2Q8IVF5 1701 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 DNAJB1P25685 340 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 NTSP30990 170 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 GDF10P55107 478 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 DNAJC3Q13217 504 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 PAFAH1B3Q15102 231 aaKnown RBP8.98□□□□□ -0.97
HDAC9-229ENST00000622668 ZNHIT3Q15649 155 aaPredicted RBP8.98□□□□□ -0.97
HDAC9-229ENST00000622668 ATP6AP1LQ52LC2 224 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 ATAD3BQ5T9A4 648 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 HECTD2Q5U5R9 776 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 KIAA1211LQ6NV74 962 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 LCA5Q86VQ0 697 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 DENND6AQ8IWF6 608 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 ZC3H3Q8IXZ2 948 aaKnown RBP8.98□□□□□ -0.97
HDAC9-229ENST00000622668 FAM9CQ8IZT9 166 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 DCBLD1Q8N8Z6 715 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 ERVK-11Q9UQG0 969 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 NPEPPSL1A6NEC2 478 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 TRPC5OSA6NMA1 111 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 CES2O00748 559 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 ENO2P09104 434 aaPredicted RBP8.98□□□□□ -0.97
HDAC9-229ENST00000622668 HOXD9P28356 352 aaPredicted RBP8.98□□□□□ -0.97
HDAC9-229ENST00000622668 AFF3P51826 1226 aaKnown RBP8.98□□□□□ -0.97
HDAC9-229ENST00000622668 OVGP1Q12889 678 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 ZNF648Q5T619 568 aaPredicted RBP8.98□□□□□ -0.97
HDAC9-229ENST00000622668 CLYBLQ8N0X4 340 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 GLYATL1Q969I3 302 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 TCF12Q99081 682 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 RHOJQ9H4E5 214 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 MRPS30Q9NP92 439 aaKnown RBP8.98□□□□□ -0.97
HDAC9-229ENST00000622668 WNT16Q9UBV4 365 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 FBXW2Q9UKT8 454 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 A0A087X1B8 175 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 A6NCN8 305 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 A8MUI8 341 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 NIPSNAP2O75323 286 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 STK16O75716 305 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 HAUS5O94927 633 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 ITGA2BP08514 1039 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 MYBL2P10244 700 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 ATP1B2P14415 290 aaPredicted RBP8.98□□□□□ -0.97
HDAC9-229ENST00000622668 TPSB2P20231 275 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 BMP8BP34820 402 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 ARHGDIAP52565 204 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 PLA2G16P53816 162 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 SLC25A11Q02978 314 aaKnown RBP8.98□□□□□ -0.97
HDAC9-229ENST00000622668 PTP4A2Q12974 167 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 OLIG2Q13516 323 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 KRT72Q14CN4 511 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 TPSAB1Q15661 275 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 MIER2Q8N344 545 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 SUN3Q8TAQ9 357 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 PTCD2Q8WV60 388 aaKnown RBP8.98□□□□□ -0.97
HDAC9-229ENST00000622668 SPDL1Q96EA4 605 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 ZIM3Q96PE6 472 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 MANSC1Q9H8J5 431 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 PRKAG3Q9UGI9 489 aa8.98□□□□□ -0.97
HDAC9-229ENST00000622668 A0A0G2JN53 185 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 SLC7A4O43246 635 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 PI15O43692 258 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 NOVA1P51513 510 aaKnown RBP8.97□□□□□ -0.97
HDAC9-229ENST00000622668 TAS2R50P59544 299 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 SIM1P81133 766 aaPredicted RBP8.97□□□□□ -0.97
HDAC9-229ENST00000622668 CUL3Q13618 768 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 QPCTQ16769 361 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 TRIM40Q6P9F5 258 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 NYAP1Q6ZVC0 841 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 CCDC124Q96CT7 223 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms