RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 TBC1D21Q8IYX1 336 aa12.92□□□□□ -0.34
CHD1L-210ENST00000622533 C8orf59Q8N0T1 100 aaPredicted RBP12.92□□□□□ -0.34
CHD1L-210ENST00000622533 CHDHQ8NE62 594 aaPredicted RBP12.92□□□□□ -0.34
CHD1L-210ENST00000622533 TMEM40Q8WWA1 233 aa12.92□□□□□ -0.34
CHD1L-210ENST00000622533 TMBIM1Q969X1 311 aa12.92□□□□□ -0.34
CHD1L-210ENST00000622533 CLSTN3Q9BQT9 956 aa12.92□□□□□ -0.34
CHD1L-210ENST00000622533 MFSD1Q9H3U5 465 aa12.92□□□□□ -0.34
CHD1L-210ENST00000622533 NTN4Q9HB63 628 aa12.92□□□□□ -0.34
CHD1L-210ENST00000622533 HPS4Q9NQG7 708 aa12.92□□□□□ -0.34
CHD1L-210ENST00000622533 SLAMF8Q9P0V8 285 aa12.92□□□□□ -0.34
CHD1L-210ENST00000622533 NUDT5Q9UKK9 219 aa12.92□□□□□ -0.34
CHD1L-210ENST00000622533 PLXNB2O15031 1838 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 TYW5A2RUC4 315 aaKnown RBP12.91□□□□□ -0.34
CHD1L-210ENST00000622533 IRAK2O43187 625 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 RFPL2O75678 378 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 THRBP10828 461 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 CCR1P32246 355 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 PIGAP37287 484 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 ARL1P40616 181 aaPredicted RBP12.91□□□□□ -0.34
CHD1L-210ENST00000622533 NCS1P62166 190 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 PHC1P78364 1004 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 MANEALQ5VSG8 457 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 TMC5Q6UXY8 1006 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 DPP9Q86TI2 863 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 POC5Q8NA72 575 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 FATE1Q969F0 183 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 C17orf80Q9BSJ5 609 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 PAK1IP1Q9NWT1 392 aaPredicted RBP12.91□□□□□ -0.34
CHD1L-210ENST00000622533 GPSM3Q9Y4H4 160 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 SNX5Q9Y5X3 404 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 TBX1O43435 398 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 WISP3O95389 354 aaPredicted RBP12.91□□□□□ -0.34
CHD1L-210ENST00000622533 RABGGTBP53611 331 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 EIF4EBP2Q13542 120 aaPredicted RBP12.91□□□□□ -0.34
CHD1L-210ENST00000622533 DGCR6Q14129 220 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 CBX2Q14781 532 aaPredicted RBP12.91□□□□□ -0.34
CHD1L-210ENST00000622533 HIST2H2ACQ16777 129 aaPredicted RBP12.91□□□□□ -0.34
CHD1L-210ENST00000622533 AFMIDQ63HM1 303 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 TAF2Q6P1X5 1199 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 KDELC1Q6UW63 502 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 TXNDC15Q96J42 360 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 BTN2A3PQ96KV6 586 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 BDH2Q9BUT1 245 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 TRIM54Q9BYV2 358 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 ALG9Q9H6U8 611 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 ATP13A1Q9HD20 1204 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 ABCC13Q9NSE7 274 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 AASSQ9UDR5 926 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 PCDHA9Q9Y5H5 950 aa12.91□□□□□ -0.34
CHD1L-210ENST00000622533 HOXC11O43248 304 aaPredicted RBP12.9□□□□□ -0.34
CHD1L-210ENST00000622533 XPNPEP2O43895 674 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 SEC24AO95486 1093 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 UMPSP11172 480 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 MAP2K4P45985 399 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 ALDH7A1P49419 539 aaKnown RBP12.9□□□□□ -0.34
CHD1L-210ENST00000622533 RENBPP51606 427 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 RACK1P63244 317 aaKnown RBP12.9□□□□□ -0.34
CHD1L-210ENST00000622533 NRG1Q02297 640 aaPredicted RBP12.9□□□□□ -0.34
CHD1L-210ENST00000622533 NFYCQ13952 458 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 DGUOKQ16854 277 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 UNC50Q53HI1 259 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 RBM48Q5RL73 367 aaKnown RBP12.9□□□□□ -0.34
CHD1L-210ENST00000622533 RSBN1Q5VWQ0 802 aaPredicted RBP12.9□□□□□ -0.34
CHD1L-210ENST00000622533 RBM23Q86U06 439 aaKnown RBP12.9□□□□□ -0.34
CHD1L-210ENST00000622533 SLC22A15Q8IZD6 547 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 OR7G1Q8NGA0 311 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 EXT2Q93063 718 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 TMEM125Q96AQ2 219 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 EMILIN2Q9BXX0 1053 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 POPDC3Q9HBV1 291 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 DKK3Q9UBP4 350 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 ZNF639Q9UID6 485 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 C16orf96A6NNT2 1141 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 PAGE1O75459 146 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 ALPLP05186 524 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 THP07101 528 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 CASP3P42574 277 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 CHRNA4P43681 627 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 ALDH3A2P51648 485 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 CD47Q08722 323 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 DAG1Q14118 895 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 MFSD10Q14728 455 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 AASDHQ4L235 1098 aaPredicted RBP12.9□□□□□ -0.34
CHD1L-210ENST00000622533 CCDC58Q4VC31 144 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 ISCA2Q86U28 154 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 RTL3Q8N8U3 475 aaKnown RBP12.9□□□□□ -0.34
CHD1L-210ENST00000622533 MYLPFQ96A32 169 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 ZNF419Q96HQ0 510 aaPredicted RBP12.9□□□□□ -0.34
CHD1L-210ENST00000622533 NODALQ96S42 347 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 TMEM30AQ9NV96 361 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 OSER1Q9NX31 292 aa12.9□□□□□ -0.34
CHD1L-210ENST00000622533 WASH4PA8MWX3 477 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 TTC34A8MYJ7 566 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 AZIN1O14977 448 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 LBPP18428 481 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 RPL9P32969 192 aaKnown RBP12.89□□□□□ -0.35
CHD1L-210ENST00000622533 GRIK2Q13002 908 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 RPS6KA2Q15349 733 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 ZNF789Q5FWF6 425 aa12.89□□□□□ -0.35
CHD1L-210ENST00000622533 LAIR2Q6ISS4 152 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms