RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 SBF1O95248 1867 aa7.85□□□□□ -1.15
VPS11-209ENST00000622309 APOC4-APOC2K7ER74 178 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 KCNN4O15554 427 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 APOC2P02655 101 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 CYP17A1P05093 508 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 IL1R2P27930 398 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 GRIA4P48058 902 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 PCP4P48539 62 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 ERVK-21P61565 698 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 NOMO3P69849 1222 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 TEKQ02763 1124 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 SPIRE1Q08AE8 756 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 EFR3AQ14156 821 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 AOC3Q16853 763 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 TRIM60Q495X7 471 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 FAM209BQ5JX69 171 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 ATF7IP2Q5U623 682 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 FAM45BPQ6NSW5 357 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 LETMD1Q6P1Q0 360 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 ZNF704Q6ZNC4 412 aaPredicted RBP7.84□□□□□ -1.15
VPS11-209ENST00000622309 CFAP77Q6ZQR2 320 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 TAGAPQ8N103 731 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 ANKRD52Q8NB46 1076 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 FAM45AQ8TCE6 357 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 POMGNT1Q8WZA1 660 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 RPL3LQ92901 407 aaKnown RBP7.84□□□□□ -1.15
VPS11-209ENST00000622309 MOCOSQ96EN8 888 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 ACCSQ96QU6 501 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 GMLQ99445 158 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 SEPHS2Q99611 448 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 HDHD5Q9BXW7 423 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 TMEM8AQ9HCN3 771 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 EVA1BQ9NVM1 165 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 MTMR4Q9NYA4 1195 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 TAS2R7Q9NYW3 318 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 ZDHHC2Q9UIJ5 367 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 FIS1Q9Y3D6 152 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 V9GYQ6 96 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 METTL15A6NJ78 407 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 CDK14O94921 469 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 SNX4O95219 450 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 CCNYL3P0C7X3 344 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 NPR1P16066 1061 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 NPR3P17342 541 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 AGXTP21549 392 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 PCMT1P22061 227 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 F8A1P23610 371 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 HTR7P34969 479 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 TGFBR1P36897 503 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 CLK2P49760 499 aaKnown RBP7.84□□□□□ -1.15
VPS11-209ENST00000622309 ALDH3A2P51648 485 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 ARSFP54793 590 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 DAB2P98082 770 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 UBE3AQ05086 875 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 SGCGQ13326 291 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 DAG1Q14118 895 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 PTPN20Q4JDL3 420 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 TBPL2Q6SJ96 375 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 CMC1Q7Z7K0 106 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 IFNEQ86WN2 208 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 PHF13Q86YI8 300 aaPredicted RBP7.84□□□□□ -1.15
VPS11-209ENST00000622309 OR4M1Q8NGD0 313 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 MCOLN3Q8TDD5 553 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 YIPF6Q96EC8 236 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 SIPA1Q96FS4 1042 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 MAGEB10Q96LZ2 347 aaPredicted RBP7.84□□□□□ -1.15
VPS11-209ENST00000622309 NECTIN4Q96NY8 510 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 BARD1Q99728 777 aaKnown RBP7.84□□□□□ -1.15
VPS11-209ENST00000622309 CDADC1Q9BWV3 514 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 TRIM8Q9BZR9 551 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 TMEM168Q9H0V1 697 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 SAV1Q9H4B6 383 aaPredicted RBP7.84□□□□□ -1.15
VPS11-209ENST00000622309 PLAC1Q9HBJ0 212 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 ZDHHC4Q9NPG8 344 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 SLC39A1Q9NY26 324 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 KCNH4Q9UQ05 1017 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 MTF2Q9Y483 593 aaPredicted RBP7.84□□□□□ -1.15
VPS11-209ENST00000622309 PCDHA1Q9Y5I3 950 aa7.84□□□□□ -1.15
VPS11-209ENST00000622309 LINC00862A6NCI5 91 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 ZNF487B1APH4 448 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 SLC1A7O00341 560 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 UBDO15205 165 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 PMM2O15305 246 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 PLA2G6O60733 806 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 PGLSO95336 258 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 VNN1O95497 513 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 CD36P16671 472 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 KDELR1P24390 212 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 HOXA13P31271 388 aaPredicted RBP7.84□□□□□ -1.16
VPS11-209ENST00000622309 GALNSP34059 522 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 CASP2P42575 452 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 MAP2K4P45985 399 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 CCR10P46092 362 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 CRKP46108 304 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 RPS5P46782 204 aaKnown RBP7.84□□□□□ -1.16
VPS11-209ENST00000622309 GZMKP49863 264 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 NAGLUP54802 743 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 BEX3Q00994 111 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 ARMCX4Q5H9R4 360 aa7.84□□□□□ -1.16
VPS11-209ENST00000622309 PIK3R6Q5UE93 754 aa7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms