RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 OSGEPL1Q9H4B0 414 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 TAS2R14Q9NYV8 317 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 PPIL1Q9Y3C6 166 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 HYOU1Q9Y4L1 999 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 PIPSLA2A3N6 862 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 BTNL10A8MVZ5 291 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 GPR37O15354 613 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 AKR1B10O60218 316 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 MAFKO60675 156 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 SHOX2O60902 331 aaPredicted RBP7.73□□□□□ -1.17
CLK1-215ENST00000621181 DNAJC6O75061 913 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 RASSF9O75901 435 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 KIAA0754O94854 1291 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 PEX11BO96011 259 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 FURINP09958 794 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 ANKRD34CP0C6C1 535 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 SERPINB6P35237 376 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 LMAN1P49257 510 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 SEPHS1P49903 392 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 CDH6P55285 790 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 GFERP55789 205 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 PPP1R2P3Q6NXS1 205 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 CYP4V2Q6ZWL3 525 aaPredicted RBP7.73□□□□□ -1.17
CLK1-215ENST00000621181 ZNF765Q7L2R6 523 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 LYSMD3Q7Z3D4 306 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 TMEM135Q86UB9 458 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 GSPT2Q8IYD1 628 aaKnown RBP7.73□□□□□ -1.17
CLK1-215ENST00000621181 GALNT6Q8NCL4 622 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 COX14Q96I36 57 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 ELMO2Q96JJ3 720 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 OR6C1Q96RD1 312 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 AGAP2Q99490 1192 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 RIOK2Q9BVS4 552 aaKnown RBP7.73□□□□□ -1.17
CLK1-215ENST00000621181 TBC1D10AQ9BXI6 508 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 TRIM7Q9C029 511 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 TWSG1Q9GZX9 223 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 NT5MQ9NPB1 228 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 SIDT1Q9NXL6 827 aaKnown RBP7.73□□□□□ -1.17
CLK1-215ENST00000621181 CPNE7Q9UBL6 633 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 LNPEPQ9UIQ6 1025 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 TLK1Q9UKI8 766 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 DNPEPQ9ULA0 475 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 TTLL3Q9Y4R7 772 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 PCYT1BQ9Y5K3 369 aaPredicted RBP7.73□□□□□ -1.17
CLK1-215ENST00000621181 OAS3Q9Y6K5 1087 aaKnown RBP7.73□□□□□ -1.17
CLK1-215ENST00000621181 NBPF19A0A087WUL8 3843 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 MN1Q10571 1320 aaPredicted RBP7.72□□□□□ -1.17
CLK1-215ENST00000621181 A0A0J9YYE9 177 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 CDC14CA4D256 554 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 LILRA5A6NI73 299 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 OR5K4A6NMS3 321 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 LRCH4O75427 683 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 TRBC1P01850 177 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 CCNYL3P0C7X3 344 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 ZNF28P17035 718 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 TYRP1P17643 537 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 AMD1P17707 334 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 GNLYP22749 145 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 AMPD1P23109 780 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 STC1P52823 247 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 PMS2P54278 862 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 SH3BP2P78314 561 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 IL11RAQ14626 422 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 SLC18A3Q16572 532 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 PLEKHA7Q6IQ23 1121 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 IRF2BP2Q7Z5L9 587 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 NLRP8Q86W28 1048 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 TRIM48Q8IWZ4 208 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 CPT1CQ8TCG5 803 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 SSC4DQ8WTU2 575 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 HSPH1Q92598 858 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 CAVIN3Q969G5 261 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 C9orf72Q96LT7 481 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 TGM7Q96PF1 710 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 SMIM14Q96QK8 99 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 POLR1EQ9GZS1 481 aaKnown RBP7.72□□□□□ -1.17
CLK1-215ENST00000621181 ACBD3Q9H3P7 528 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 RMI1Q9H9A7 625 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.72□□□□□ -1.17
CLK1-215ENST00000621181 ETNK2Q9NVF9 386 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 SMARCAL1Q9NZC9 954 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 RNF14Q9UBS8 474 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 CENPEQ02224 2701 aa7.72□□□□□ -1.17
CLK1-215ENST00000621181 ITPR2Q14571 2701 aa7.71□□□□□ -1.17
CLK1-215ENST00000621181 A0A087X0T9 212 aa7.71□□□□□ -1.17
CLK1-215ENST00000621181 C1orf232A0A0U1RR37 186 aa7.71□□□□□ -1.17
CLK1-215ENST00000621181 A6NCN8 305 aa7.71□□□□□ -1.17
CLK1-215ENST00000621181 TMEM191CA6NGB0 347 aa7.71□□□□□ -1.17
CLK1-215ENST00000621181 ENO4A6NNW6 628 aa7.71□□□□□ -1.17
CLK1-215ENST00000621181 GRID2O43424 1007 aa7.71□□□□□ -1.17
CLK1-215ENST00000621181 CREG1O75629 220 aa7.71□□□□□ -1.17
CLK1-215ENST00000621181 DNAJB5O75953 348 aa7.71□□□□□ -1.17
CLK1-215ENST00000621181 UBXN7O94888 489 aa7.71□□□□□ -1.17
CLK1-215ENST00000621181 CLDN7O95471 211 aa7.71□□□□□ -1.17
CLK1-215ENST00000621181 FAM228BP0C875 321 aa7.71□□□□□ -1.17
CLK1-215ENST00000621181 FERP16591 822 aa7.71□□□□□ -1.17
CLK1-215ENST00000621181 CA4P22748 312 aa7.71□□□□□ -1.17
CLK1-215ENST00000621181 GARSP41250 739 aaKnown RBP7.71□□□□□ -1.17
CLK1-215ENST00000621181 PRKCIP41743 596 aa7.71□□□□□ -1.17
CLK1-215ENST00000621181 DPYSL2Q16555 572 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms