RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 LSM14AQ8ND56 463 aaKnown RBP16.89■□□□□ 0.29
HMGN3-203ENST00000620514 DTX3LQ8TDB6 740 aa16.89■□□□□ 0.29
HMGN3-203ENST00000620514 JPH3Q8WXH2 748 aaPredicted RBP16.89■□□□□ 0.29
HMGN3-203ENST00000620514 SPATA13Q96N96 652 aa16.89■□□□□ 0.29
HMGN3-203ENST00000620514 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.89■□□□□ 0.29
HMGN3-203ENST00000620514 B3GNT4Q9C0J1 378 aa16.89■□□□□ 0.29
HMGN3-203ENST00000620514 SLC39A1Q9NY26 324 aa16.89■□□□□ 0.29
HMGN3-203ENST00000620514 OGFRQ9NZT2 677 aa16.89■□□□□ 0.29
HMGN3-203ENST00000620514 KLHL3Q9UH77 587 aa16.89■□□□□ 0.29
HMGN3-203ENST00000620514 AMFRQ9UKV5 643 aa16.89■□□□□ 0.29
HMGN3-203ENST00000620514 PKP3Q9Y446 797 aa16.89■□□□□ 0.29
HMGN3-203ENST00000620514 B3GALT1Q9Y5Z6 326 aa16.89■□□□□ 0.29
HMGN3-203ENST00000620514 LILRA5A6NI73 299 aa16.88■□□□□ 0.29
HMGN3-203ENST00000620514 OR52A4PA6NMU1 304 aa16.88■□□□□ 0.29
HMGN3-203ENST00000620514 STX7O15400 261 aaKnown RBP16.88■□□□□ 0.29
HMGN3-203ENST00000620514 DDX3YO15523 660 aaKnown RBP16.88■□□□□ 0.29
HMGN3-203ENST00000620514 TJP3O95049 919 aa16.88■□□□□ 0.29
HMGN3-203ENST00000620514 VIPP01282 170 aa16.88■□□□□ 0.29
HMGN3-203ENST00000620514 WT1P19544 449 aaPredicted RBP16.88■□□□□ 0.29
HMGN3-203ENST00000620514 CETN2P41208 172 aa16.88■□□□□ 0.29
HMGN3-203ENST00000620514 GTF2H3Q13889 308 aa16.88■□□□□ 0.29
HMGN3-203ENST00000620514 GPRC6AQ5T6X5 926 aa16.88■□□□□ 0.29
HMGN3-203ENST00000620514 ABRAXAS1Q6UWZ7 409 aa16.88■□□□□ 0.29
HMGN3-203ENST00000620514 TMEM26Q6ZUK4 368 aa16.88■□□□□ 0.29
HMGN3-203ENST00000620514 PEX26Q7Z412 305 aa16.88■□□□□ 0.29
HMGN3-203ENST00000620514 BMPERQ8N8U9 685 aa16.88■□□□□ 0.29
HMGN3-203ENST00000620514 BRSK1Q8TDC3 778 aa16.88■□□□□ 0.29
HMGN3-203ENST00000620514 NAT14Q8WUY8 206 aa16.88■□□□□ 0.29
HMGN3-203ENST00000620514 TTC25Q96NG3 672 aa16.88■□□□□ 0.29
HMGN3-203ENST00000620514 FERMT1Q9BQL6 677 aa16.88■□□□□ 0.29
HMGN3-203ENST00000620514 WDR37Q9Y2I8 494 aa16.88■□□□□ 0.29
HMGN3-203ENST00000620514 PCDHGA3Q9Y5H0 932 aa16.88■□□□□ 0.29
HMGN3-203ENST00000620514 SLC30A1Q9Y6M5 507 aa16.88■□□□□ 0.29
HMGN3-203ENST00000620514 SDK2Q58EX2 2172 aa16.88■□□□□ 0.29
HMGN3-203ENST00000620514 TYRP1P17643 537 aa16.87■□□□□ 0.29
HMGN3-203ENST00000620514 IDSP22304 550 aa16.87■□□□□ 0.29
HMGN3-203ENST00000620514 CD82P27701 267 aa16.87■□□□□ 0.29
HMGN3-203ENST00000620514 GFERP55789 205 aa16.87■□□□□ 0.29
HMGN3-203ENST00000620514 MSLNQ13421 630 aaPredicted RBP16.87■□□□□ 0.29
HMGN3-203ENST00000620514 SPARCL1Q14515 664 aa16.87■□□□□ 0.29
HMGN3-203ENST00000620514 PRPSAP1Q14558 356 aa16.87■□□□□ 0.29
HMGN3-203ENST00000620514 CLCA4Q14CN2 919 aa16.87■□□□□ 0.29
HMGN3-203ENST00000620514 TAF1AQ15573 450 aaPredicted RBP16.87■□□□□ 0.29
HMGN3-203ENST00000620514 MANEAQ5SRI9 462 aa16.87■□□□□ 0.29
HMGN3-203ENST00000620514 LDLRAP1Q5SW96 308 aa16.87■□□□□ 0.29
HMGN3-203ENST00000620514 ANKS6Q68DC2 871 aa16.87■□□□□ 0.29
HMGN3-203ENST00000620514 TRIM48Q8IWZ4 208 aa16.87■□□□□ 0.29
HMGN3-203ENST00000620514 AVL9Q8NBF6 648 aa16.87■□□□□ 0.29
HMGN3-203ENST00000620514 DDHD1Q8NEL9 900 aa16.87■□□□□ 0.29
HMGN3-203ENST00000620514 OR4K2Q8NGD2 314 aa16.87■□□□□ 0.29
HMGN3-203ENST00000620514 ZNF398Q8TD17 642 aa16.87■□□□□ 0.29
HMGN3-203ENST00000620514 UCK1Q9HA47 277 aa16.87■□□□□ 0.29
HMGN3-203ENST00000620514 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.87■□□□□ 0.29
HMGN3-203ENST00000620514 FKBPLQ9UIM3 349 aa16.87■□□□□ 0.29
HMGN3-203ENST00000620514 R3HDM2Q9Y2K5 976 aaKnown RBP16.87■□□□□ 0.29
HMGN3-203ENST00000620514 AAR2Q9Y312 384 aaKnown RBP16.87■□□□□ 0.29
HMGN3-203ENST00000620514 PCDHB11Q9Y5F2 797 aa16.87■□□□□ 0.29
HMGN3-203ENST00000620514 BAHCC1Q9P281 2608 aa16.86■□□□□ 0.29
HMGN3-203ENST00000620514 OR2AG2A6NM03 316 aa16.86■□□□□ 0.29
HMGN3-203ENST00000620514 B4E171 279 aa16.86■□□□□ 0.29
HMGN3-203ENST00000620514 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.86■□□□□ 0.29
HMGN3-203ENST00000620514 STMND1H3BQB6 276 aa16.86■□□□□ 0.29
HMGN3-203ENST00000620514 POP7O75817 140 aaKnown RBP16.86■□□□□ 0.29
HMGN3-203ENST00000620514 STK10O94804 968 aaKnown RBP16.86■□□□□ 0.29
HMGN3-203ENST00000620514 PRAMEF1O95521 474 aa16.86■□□□□ 0.29
HMGN3-203ENST00000620514 LPOP22079 712 aaPredicted RBP16.86■□□□□ 0.29
HMGN3-203ENST00000620514 CDC25BP30305 580 aa16.86■□□□□ 0.29
HMGN3-203ENST00000620514 TSPAN7P41732 249 aa16.86■□□□□ 0.29
HMGN3-203ENST00000620514 KIF5AQ12840 1032 aa16.86■□□□□ 0.29
HMGN3-203ENST00000620514 ITGA9Q13797 1035 aa16.86■□□□□ 0.29
HMGN3-203ENST00000620514 LY6DQ14210 128 aa16.86■□□□□ 0.29
HMGN3-203ENST00000620514 AGAP9Q5VTM2 703 aa16.86■□□□□ 0.29
HMGN3-203ENST00000620514 DENND5AQ6IQ26 1287 aa16.86■□□□□ 0.29
HMGN3-203ENST00000620514 TMEM220Q6QAJ8 160 aa16.86■□□□□ 0.29
HMGN3-203ENST00000620514 WASH2PQ6VEQ5 465 aa16.86■□□□□ 0.29
HMGN3-203ENST00000620514 FAM83HQ6ZRV2 1179 aaPredicted RBP16.86■□□□□ 0.29
HMGN3-203ENST00000620514 MICALCLQ6ZW33 695 aa16.86■□□□□ 0.29
HMGN3-203ENST00000620514 CCDC112Q8NEF3 446 aa16.86■□□□□ 0.29
HMGN3-203ENST00000620514 WBP1Q96G27 269 aa16.86■□□□□ 0.29
HMGN3-203ENST00000620514 CTRCQ99895 268 aa16.86■□□□□ 0.29
HMGN3-203ENST00000620514 DDA1Q9BW61 102 aa16.86■□□□□ 0.29
HMGN3-203ENST00000620514 SEMA4CQ9C0C4 833 aa16.86■□□□□ 0.29
HMGN3-203ENST00000620514 EPB41L1Q9H4G0 881 aa16.86■□□□□ 0.29
HMGN3-203ENST00000620514 WASH6PQ9NQA3 447 aa16.86■□□□□ 0.29
HMGN3-203ENST00000620514 SMOXQ9NWM0 555 aa16.86■□□□□ 0.29
HMGN3-203ENST00000620514 IMPACTQ9P2X3 320 aa16.86■□□□□ 0.29
HMGN3-203ENST00000620514 CAPN6Q9Y6Q1 641 aa16.86■□□□□ 0.29
HMGN3-203ENST00000620514 TCRBV7S2A1N4TA0A589 114 aa16.85■□□□□ 0.29
HMGN3-203ENST00000620514 C2orf81A6NN90 581 aa16.85■□□□□ 0.29
HMGN3-203ENST00000620514 PPFIA2O75334 1257 aa16.85■□□□□ 0.29
HMGN3-203ENST00000620514 UBXN7O94888 489 aa16.85■□□□□ 0.29
HMGN3-203ENST00000620514 VCLP18206 1134 aa16.85■□□□□ 0.29
HMGN3-203ENST00000620514 PBLDP30039 288 aaPredicted RBP16.85■□□□□ 0.29
HMGN3-203ENST00000620514 TMPRSS15P98073 1019 aa16.85■□□□□ 0.29
HMGN3-203ENST00000620514 MC2RQ01718 297 aa16.85■□□□□ 0.29
HMGN3-203ENST00000620514 C19orf57Q0VDD7 668 aa16.85■□□□□ 0.29
HMGN3-203ENST00000620514 DET1Q7L5Y6 550 aa16.85■□□□□ 0.29
HMGN3-203ENST00000620514 AMZ2Q86W34 360 aa16.85■□□□□ 0.29
HMGN3-203ENST00000620514 SYCE1Q8N0S2 351 aa16.85■□□□□ 0.29
HMGN3-203ENST00000620514 ZNF843Q8N446 348 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms