RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 PGBD5Q8N414 524 aa21.36■■□□□ 1.01
SGMS1-210ENST00000619438 OR6K2Q8NGY2 324 aa21.36■■□□□ 1.01
SGMS1-210ENST00000619438 STON2Q8WXE9 905 aa21.36■■□□□ 1.01
SGMS1-210ENST00000619438 POLR1EQ9GZS1 481 aaKnown RBP21.36■■□□□ 1.01
SGMS1-210ENST00000619438 TMEM9BQ9NQ34 198 aa21.36■■□□□ 1.01
SGMS1-210ENST00000619438 DLL3Q9NYJ7 618 aa21.36■■□□□ 1.01
SGMS1-210ENST00000619438 TAS2R1Q9NYW7 299 aa21.36■■□□□ 1.01
SGMS1-210ENST00000619438 NUMA1Q14980 2115 aa21.36■■□□□ 1.01
SGMS1-210ENST00000619438 A0A087X1B8 175 aa21.35■■□□□ 1.01
SGMS1-210ENST00000619438 CCDC78A2IDD5 438 aa21.35■■□□□ 1.01
SGMS1-210ENST00000619438 POP4O95707 220 aaKnown RBP21.35■■□□□ 1.01
SGMS1-210ENST00000619438 SYPP08247 313 aa21.35■■□□□ 1.01
SGMS1-210ENST00000619438 MAPK8P45983 427 aa21.35■■□□□ 1.01
SGMS1-210ENST00000619438 MPP1Q00013 466 aa21.35■■□□□ 1.01
SGMS1-210ENST00000619438 ITKQ08881 620 aa21.35■■□□□ 1.01
SGMS1-210ENST00000619438 SEPT6Q14141 434 aa21.35■■□□□ 1.01
SGMS1-210ENST00000619438 IHHQ14623 411 aa21.35■■□□□ 1.01
SGMS1-210ENST00000619438 MYLK3Q32MK0 819 aa21.35■■□□□ 1.01
SGMS1-210ENST00000619438 ZNF470Q6ECI4 717 aa21.35■■□□□ 1.01
SGMS1-210ENST00000619438 CENPLQ8N0S6 344 aaPredicted RBP21.35■■□□□ 1.01
SGMS1-210ENST00000619438 FEM1CQ96JP0 617 aa21.35■■□□□ 1.01
SGMS1-210ENST00000619438 RILPQ96NA2 401 aa21.35■■□□□ 1.01
SGMS1-210ENST00000619438 FSCN3Q9NQT6 498 aa21.35■■□□□ 1.01
SGMS1-210ENST00000619438 ARMCX1Q9P291 453 aa21.35■■□□□ 1.01
SGMS1-210ENST00000619438 TAGLN3Q9UI15 199 aa21.35■■□□□ 1.01
SGMS1-210ENST00000619438 APOBEC2Q9Y235 224 aaKnown RBP21.35■■□□□ 1.01
SGMS1-210ENST00000619438 WASF2Q9Y6W5 498 aa21.35■■□□□ 1.01
SGMS1-210ENST00000619438 C4orf47A7E2U8 309 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 GYG2O15488 501 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 KLHL2O95198 593 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 F7P08709 466 aaPredicted RBP21.34■■□□□ 1.01
SGMS1-210ENST00000619438 SBK3P0C264 359 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 ATXN1LP0C7T5 689 aaKnown RBP21.34■■□□□ 1.01
SGMS1-210ENST00000619438 CD27P26842 260 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 LEPRP48357 1165 aaKnown RBP21.34■■□□□ 1.01
SGMS1-210ENST00000619438 MAXP61244 160 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 ATXN7L2Q5T6C5 722 aaPredicted RBP21.34■■□□□ 1.01
SGMS1-210ENST00000619438 LIPMQ5VYY2 423 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 TREML1Q86YW5 311 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 SLC25A41Q8N5S1 370 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 CFAP61Q8NHU2 1237 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 GPR78Q96P69 363 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 EBF4Q9BQW3 602 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 RTKNQ9BST9 563 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 PNPOQ9NVS9 261 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 RIMKLBQ9ULI2 386 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 CACNA1AO00555 2505 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 ARHGAP33O14559 1287 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 SLC30A4O14863 429 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 IGSF6O95976 241 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 HLA-DPA1P20036 260 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 GKP32189 559 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 IDH3AP50213 366 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 KPNA2P52292 529 aaKnown RBP21.34■■□□□ 1.01
SGMS1-210ENST00000619438 LIMK1P53667 647 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 ACVR1Q04771 509 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 SIRPB2Q5JXA9 342 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 FBXL19Q6PCT2 694 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 NAPRTQ6XQN6 538 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 ERN2Q76MJ5 926 aaKnown RBP21.34■■□□□ 1.01
SGMS1-210ENST00000619438 MAVSQ7Z434 540 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 ARRDC3Q96B67 414 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 LRIG1Q96JA1 1093 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 DRC3Q9H069 523 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 CDH19Q9H159 772 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 CAPN10Q9HC96 672 aa21.34■■□□□ 1.01
SGMS1-210ENST00000619438 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.34■■□□□ 1.01
SGMS1-210ENST00000619438 RUVBL2Q9Y230 463 aaKnown RBP21.34■■□□□ 1.01
SGMS1-210ENST00000619438 PHGDHO43175 533 aaKnown RBP21.33■■□□□ 1
SGMS1-210ENST00000619438 PLRG1O43660 514 aaKnown RBP21.33■■□□□ 1
SGMS1-210ENST00000619438 SNUPNO95149 360 aaKnown RBP21.33■■□□□ 1
SGMS1-210ENST00000619438 IGHV4-34P06331 123 aa21.33■■□□□ 1
SGMS1-210ENST00000619438 AFF3P51826 1226 aaKnown RBP21.33■■□□□ 1
SGMS1-210ENST00000619438 ASPHQ12797 758 aa21.33■■□□□ 1
SGMS1-210ENST00000619438 CYTH1Q15438 398 aa21.33■■□□□ 1
SGMS1-210ENST00000619438 UAP1L1Q3KQV9 507 aa21.33■■□□□ 1
SGMS1-210ENST00000619438 AGBL4Q5VU57 503 aa21.33■■□□□ 1
SGMS1-210ENST00000619438 LRRC8EQ6NSJ5 796 aa21.33■■□□□ 1
SGMS1-210ENST00000619438 RINLQ6ZS11 566 aa21.33■■□□□ 1
SGMS1-210ENST00000619438 KDELC2Q7Z4H8 507 aa21.33■■□□□ 1
SGMS1-210ENST00000619438 TEX9Q8N6V9 391 aa21.33■■□□□ 1
SGMS1-210ENST00000619438 OR13J1Q8NGT2 312 aa21.33■■□□□ 1
SGMS1-210ENST00000619438 GATA5Q9BWX5 397 aaPredicted RBP21.33■■□□□ 1
SGMS1-210ENST00000619438 C1orf21Q9H246 121 aa21.33■■□□□ 1
SGMS1-210ENST00000619438 ADAMTS9Q9P2N4 1935 aa21.33■■□□□ 1
SGMS1-210ENST00000619438 A0A1W2PPC4 97 aa21.32■■□□□ 1
SGMS1-210ENST00000619438 HSPA4LO95757 839 aa21.32■■□□□ 1
SGMS1-210ENST00000619438 FGF1P05230 155 aa21.32■■□□□ 1
SGMS1-210ENST00000619438 EZRP15311 586 aaKnown RBP21.32■■□□□ 1
SGMS1-210ENST00000619438 MAT2AP31153 395 aaKnown RBP21.32■■□□□ 1
SGMS1-210ENST00000619438 CCR5P51681 352 aa21.32■■□□□ 1
SGMS1-210ENST00000619438 TAS2R39P59534 338 aa21.32■■□□□ 1
SGMS1-210ENST00000619438 TEAD4Q15561 434 aa21.32■■□□□ 1
SGMS1-210ENST00000619438 CEP97Q8IW35 865 aa21.32■■□□□ 1
SGMS1-210ENST00000619438 ARHGAP24Q8N264 748 aa21.32■■□□□ 1
SGMS1-210ENST00000619438 BBS5Q8N3I7 341 aa21.32■■□□□ 1
SGMS1-210ENST00000619438 FSTL5Q8N475 847 aaPredicted RBP21.32■■□□□ 1
SGMS1-210ENST00000619438 KCTD4Q8WVF5 259 aa21.32■■□□□ 1
SGMS1-210ENST00000619438 EXOC2Q96KP1 924 aa21.32■■□□□ 1
SGMS1-210ENST00000619438 HDAC8Q9BY41 377 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms