RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 GRHL3Q8TE85 626 aa2.56□□□□□ -2
TARDBP-220ENST00000618606 UTP15Q8TED0 518 aaKnown RBP2.56□□□□□ -2
TARDBP-220ENST00000618606 ZNRF4Q8WWF5 429 aa2.56□□□□□ -2
TARDBP-220ENST00000618606 MPP4Q96JB8 637 aa2.56□□□□□ -2
TARDBP-220ENST00000618606 PRMT6Q96LA8 375 aaPredicted RBP2.56□□□□□ -2
TARDBP-220ENST00000618606 HARBI1Q96MB7 349 aa2.56□□□□□ -2
TARDBP-220ENST00000618606 SLX1AQ9BQ83 275 aa2.56□□□□□ -2
TARDBP-220ENST00000618606 RTP3Q9BQQ7 232 aa2.56□□□□□ -2
TARDBP-220ENST00000618606 ZHX3Q9H4I2 956 aa2.56□□□□□ -2
TARDBP-220ENST00000618606 SLC6A13Q9NSD5 602 aa2.56□□□□□ -2
TARDBP-220ENST00000618606 KLHL8Q9P2G9 620 aaPredicted RBP2.56□□□□□ -2
TARDBP-220ENST00000618606 ZNF69Q9UC07 566 aa2.56□□□□□ -2
TARDBP-220ENST00000618606 DNAJB4Q9UDY4 337 aa2.56□□□□□ -2
TARDBP-220ENST00000618606 STK36Q9NRP7 1315 aa2.56□□□□□ -2
TARDBP-220ENST00000618606 HMGB1P1B2RPK0 211 aaPredicted RBP2.55□□□□□ -2
TARDBP-220ENST00000618606 TMEM178BH3BS89 294 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 EIF3FO00303 357 aaPredicted RBP2.55□□□□□ -2
TARDBP-220ENST00000618606 SYNCRIPO60506 623 aaKnown RBP2.55□□□□□ -2
TARDBP-220ENST00000618606 MLYCDO95822 493 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 TPOP07202 933 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 IFIT1P09914 478 aaKnown RBP2.55□□□□□ -2
TARDBP-220ENST00000618606 HSD3B1P14060 373 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 CEBPBP17676 345 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 NR2F2P24468 414 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 CNTFP26441 200 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 TLX1P31314 330 aaPredicted RBP2.55□□□□□ -2
TARDBP-220ENST00000618606 KCNJ10P78508 379 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 PPFIA1Q13136 1202 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 TBX2Q13207 712 aaPredicted RBP2.55□□□□□ -2
TARDBP-220ENST00000618606 PRICKLE4Q2TBC4 344 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 ASPRV1Q53RT3 343 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 XKR6Q5GH73 641 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 TCTEX1D4Q5JR98 221 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 TRIM65Q6PJ69 517 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 MAATS1Q7Z4T9 603 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 ERC1Q8IUD2 1116 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 CCDC13Q8IYE1 715 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 GBGT1Q8N5D6 347 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 IL17REQ8NFR9 667 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 TRIM63Q969Q1 353 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 OXNAD1Q96HP4 312 aaPredicted RBP2.55□□□□□ -2
TARDBP-220ENST00000618606 C18orf12Q96KH6 178 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 UBXN10Q96LJ8 280 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 SIL1Q9H173 461 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 MAGIXQ9H6Y5 334 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 PRR34Q9NV39 138 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 SLC38A7Q9NVC3 462 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 GGA3Q9NZ52 723 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 KCND2Q9NZV8 630 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 OR14J1Q9UGF5 321 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 HAO1Q9UJM8 370 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 LRRFIP2Q9Y608 721 aaKnown RBP2.55□□□□□ -2
TARDBP-220ENST00000618606 RPS6KL1Q9Y6S9 549 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 ZHX2Q9Y6X8 837 aa2.55□□□□□ -2
TARDBP-220ENST00000618606 J3KRW8 73 aa2.54□□□□□ -2
TARDBP-220ENST00000618606 PLOD2O00469 737 aa2.54□□□□□ -2
TARDBP-220ENST00000618606 RTL8CO15255 209 aa2.54□□□□□ -2
TARDBP-220ENST00000618606 POLBP06746 335 aa2.54□□□□□ -2
TARDBP-220ENST00000618606 LIPFP07098 398 aa2.54□□□□□ -2
TARDBP-220ENST00000618606 LDHCP07864 332 aa2.54□□□□□ -2
TARDBP-220ENST00000618606 ZNF182P17025 639 aaPredicted RBP2.54□□□□□ -2
TARDBP-220ENST00000618606 WNT5AP41221 380 aa2.54□□□□□ -2
TARDBP-220ENST00000618606 PIP4K2AP48426 406 aaPredicted RBP2.54□□□□□ -2
TARDBP-220ENST00000618606 OLIG2Q13516 323 aa2.54□□□□□ -2
TARDBP-220ENST00000618606 CXorf66Q5JRM2 361 aaPredicted RBP2.54□□□□□ -2
TARDBP-220ENST00000618606 CYP26C1Q6V0L0 522 aa2.54□□□□□ -2
TARDBP-220ENST00000618606 PCGF5Q86SE9 256 aa2.54□□□□□ -2
TARDBP-220ENST00000618606 SLC38A9Q8NBW4 561 aa2.54□□□□□ -2
TARDBP-220ENST00000618606 OR14L1PQ8NHC6 308 aa2.54□□□□□ -2
TARDBP-220ENST00000618606 SKA1Q96BD8 255 aa2.54□□□□□ -2
TARDBP-220ENST00000618606 RRNAD1Q96FB5 475 aaKnown RBP2.54□□□□□ -2
TARDBP-220ENST00000618606 APOPT1Q96IL0 206 aa2.54□□□□□ -2
TARDBP-220ENST00000618606 FOXN4Q96NZ1 517 aa2.54□□□□□ -2
TARDBP-220ENST00000618606 PKP2Q99959 881 aa2.54□□□□□ -2
TARDBP-220ENST00000618606 FGFBP2Q9BYJ0 223 aa2.54□□□□□ -2
TARDBP-220ENST00000618606 GPR63Q9BZJ6 419 aa2.54□□□□□ -2
TARDBP-220ENST00000618606 PRKRIP1Q9H875 184 aaPredicted RBP2.54□□□□□ -2
TARDBP-220ENST00000618606 KIF9Q9HAQ2 790 aa2.54□□□□□ -2
TARDBP-220ENST00000618606 VEZTQ9HBM0 779 aa2.54□□□□□ -2
TARDBP-220ENST00000618606 PLCXD1Q9NUJ7 323 aa2.54□□□□□ -2
TARDBP-220ENST00000618606 FAM120CQ9NX05 1096 aaKnown RBP2.54□□□□□ -2
TARDBP-220ENST00000618606 UBA2Q9UBT2 640 aaPredicted RBP2.54□□□□□ -2
TARDBP-220ENST00000618606 SWAP70Q9UH65 585 aa2.54□□□□□ -2
TARDBP-220ENST00000618606 PGAP2Q9UHJ9 254 aa2.54□□□□□ -2
TARDBP-220ENST00000618606 CRYL1Q9Y2S2 319 aa2.54□□□□□ -2
TARDBP-220ENST00000618606 CSAG2Q9Y5P2 127 aa2.54□□□□□ -2
TARDBP-220ENST00000618606 A0A1B0GVC2 190 aa2.53□□□□□ -2
TARDBP-220ENST00000618606 TSPAN4O14817 238 aa2.53□□□□□ -2
TARDBP-220ENST00000618606 EPB41L2O43491 1005 aaKnown RBP2.53□□□□□ -2
TARDBP-220ENST00000618606 AP2A2O94973 939 aa2.53□□□□□ -2
TARDBP-220ENST00000618606 FRMD6-AS1P0C7T7 363 aa2.53□□□□□ -2
TARDBP-220ENST00000618606 EPHA2P29317 976 aa2.53□□□□□ -2
TARDBP-220ENST00000618606 PTP4A2Q12974 167 aa2.53□□□□□ -2
TARDBP-220ENST00000618606 RIGQ13278 110 aa2.53□□□□□ -2
TARDBP-220ENST00000618606 G3BP1Q13283 466 aaKnown RBP eCLIP2.53□□□□□ -25e-9■□□□□ 10.1
TARDBP-220ENST00000618606 BAK1Q16611 211 aa2.53□□□□□ -2
TARDBP-220ENST00000618606 NSUN5P2Q63ZY6 315 aa2.53□□□□□ -2
TARDBP-220ENST00000618606 PWWP2BQ6NUJ5 590 aa2.53□□□□□ -2
TARDBP-220ENST00000618606 FAM180BQ6P0A1 224 aa2.53□□□□□ -2
TARDBP-220ENST00000618606 HEATR4Q86WZ0 1026 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms