RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 RAB6BQ9NRW1 208 aa15.75■□□□□ 0.11
BRCA1-228ENST00000618469 PAK5Q9P286 719 aa15.75■□□□□ 0.11
BRCA1-228ENST00000618469 SLC23A2Q9UGH3 650 aa15.75■□□□□ 0.11
BRCA1-228ENST00000618469 CRLS1Q9UJA2 301 aa15.75■□□□□ 0.11
BRCA1-228ENST00000618469 JRKLQ9Y4A0 524 aa15.75■□□□□ 0.11
BRCA1-228ENST00000618469 CCDC78A2IDD5 438 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 OR2AG2A6NM03 316 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 ERI2A8K979 691 aaKnown RBP15.74■□□□□ 0.11
BRCA1-228ENST00000618469 PPM1DO15297 605 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 KLK10O43240 276 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 ZSCAN5DPP0CG00 497 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 MSH3P20585 1137 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 ITGALP20701 1170 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 HADHAP40939 763 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 FASLGP48023 281 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 PPM1FP49593 454 aaPredicted RBP15.74■□□□□ 0.11
BRCA1-228ENST00000618469 CTSCP53634 463 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 INHBCP55103 352 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 B4GALNT1Q00973 533 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 HHEXQ03014 270 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 SEMA5AQ13591 1074 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 KIAA1614Q5VZ46 1190 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 DRICH1Q6PGQ1 229 aaPredicted RBP15.74■□□□□ 0.11
BRCA1-228ENST00000618469 PPP1R21Q6ZMI0 780 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 GSTA5Q7RTV2 222 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 SLC35F6Q8N357 371 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 RASGEF1AQ8N9B8 481 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 DNAAF3Q8N9W5 541 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 ZNF248Q8NDW4 579 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 PDLIM2Q96JY6 352 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 TRIM4Q9C037 500 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 STRADBQ9C0K7 418 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 POLR1BQ9H9Y6 1135 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 RDH14Q9HBH5 336 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 PRDM8Q9NQV8 689 aa15.74■□□□□ 0.11
BRCA1-228ENST00000618469 TRMT1Q9NXH9 659 aaKnown RBP15.74■□□□□ 0.11
BRCA1-228ENST00000618469 CCDC187A0A096LP49 1063 aa15.73■□□□□ 0.11
BRCA1-228ENST00000618469 A0A1W2PNU3 283 aaPredicted RBP15.73■□□□□ 0.11
BRCA1-228ENST00000618469 PMS2P1A4D2B8 440 aa15.73■□□□□ 0.11
BRCA1-228ENST00000618469 B8ZZF3 427 aa15.73■□□□□ 0.11
BRCA1-228ENST00000618469 ZW10O43264 779 aa15.73■□□□□ 0.11
BRCA1-228ENST00000618469 B4GAT1O43505 415 aa15.73■□□□□ 0.11
BRCA1-228ENST00000618469 VCLP18206 1134 aa15.73■□□□□ 0.11
BRCA1-228ENST00000618469 PBLDP30039 288 aaPredicted RBP15.73■□□□□ 0.11
BRCA1-228ENST00000618469 MC4RP32245 332 aa15.73■□□□□ 0.11
BRCA1-228ENST00000618469 GPR3P46089 330 aa15.73■□□□□ 0.11
BRCA1-228ENST00000618469 KCNJ1P48048 391 aa15.73■□□□□ 0.11
BRCA1-228ENST00000618469 CLCNKAP51800 687 aa15.73■□□□□ 0.11
BRCA1-228ENST00000618469 PCBP4P57723 403 aaKnown RBP15.73■□□□□ 0.11
BRCA1-228ENST00000618469 TMPRSS3P57727 454 aa15.73■□□□□ 0.11
BRCA1-228ENST00000618469 BASP1P80723 227 aaKnown RBP15.73■□□□□ 0.11
BRCA1-228ENST00000618469 XIAPP98170 497 aa15.73■□□□□ 0.11
BRCA1-228ENST00000618469 CDH17Q12864 832 aa15.73■□□□□ 0.11
BRCA1-228ENST00000618469 BROXQ5VW32 411 aa15.73■□□□□ 0.11
BRCA1-228ENST00000618469 IYDQ6PHW0 289 aa15.73■□□□□ 0.11
BRCA1-228ENST00000618469 MICALCLQ6ZW33 695 aa15.73■□□□□ 0.11
BRCA1-228ENST00000618469 DET1Q7L5Y6 550 aa15.73■□□□□ 0.11
BRCA1-228ENST00000618469 C11orf96Q7Z7L8 435 aa15.73■□□□□ 0.11
BRCA1-228ENST00000618469 WDR36Q8NI36 951 aaKnown RBP15.73■□□□□ 0.11
BRCA1-228ENST00000618469 LIN37Q96GY3 246 aaPredicted RBP15.73■□□□□ 0.11
BRCA1-228ENST00000618469 TMEM74Q96NL1 305 aa15.73■□□□□ 0.11
BRCA1-228ENST00000618469 SLC38A3Q99624 504 aa15.73■□□□□ 0.11
BRCA1-228ENST00000618469 SARS2Q9NP81 518 aaKnown RBP15.73■□□□□ 0.11
BRCA1-228ENST00000618469 KCNK4Q9NYG8 393 aa15.73■□□□□ 0.11
BRCA1-228ENST00000618469 KIF26BQ2KJY2 2108 aa15.73■□□□□ 0.11
BRCA1-228ENST00000618469 IGHV1OR21-1A0A087WYE8 117 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 KIR2DS5A0A0G2JLQ3 304 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 A0A0G2JNG1 304 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 KIR2DS3K7RE56 304 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 AGRPO00253 132 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 KIF5CO60282 957 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 SUN1O94901 812 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 CPNE6O95741 557 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 GAS8O95995 478 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 APRTP07741 180 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 MSNP26038 577 aaKnown RBP15.72■□□□□ 0.11
BRCA1-228ENST00000618469 CCKBRP32239 447 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 CSF2RBP32927 897 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 RPL22P35268 128 aaKnown RBP15.72■□□□□ 0.11
BRCA1-228ENST00000618469 LSSP48449 732 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 RHDQ02161 417 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 KIR2DS5Q14953 304 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 CCDC38Q502W7 563 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 FNBP1LQ5T0N5 605 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.72■□□□□ 0.11
BRCA1-228ENST00000618469 PHF19Q5T6S3 580 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 NKAIN2Q5VXU1 208 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 PRICKLE2Q7Z3G6 844 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 TMPRSS9Q7Z410 1059 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 SNX20Q7Z614 316 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 SLC9B2Q86UD5 537 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 SLITRK4Q8IW52 837 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 NXPE1Q8N323 547 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 PRELID2Q8N945 189 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 NAT14Q8WUY8 206 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 KCNE4Q8WWG9 221 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 ULK4Q96C45 1275 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 MS4A14Q96JA4 679 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 C19orf43Q9BQ61 176 aa15.72■□□□□ 0.11
BRCA1-228ENST00000618469 NUDT22Q9BRQ3 303 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms