RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 AARS2Q5JTZ9 985 aaKnown RBP12.27□□□□□ -0.45
CIITA-212ENST00000618207 TMEM154Q6P9G4 183 aa12.27□□□□□ -0.45
CIITA-212ENST00000618207 MBOAT1Q6ZNC8 495 aa12.27□□□□□ -0.45
CIITA-212ENST00000618207 HTR3DQ70Z44 454 aa12.27□□□□□ -0.45
CIITA-212ENST00000618207 RETREG3Q86VR2 466 aa12.27□□□□□ -0.45
CIITA-212ENST00000618207 SDR16C5Q8N3Y7 309 aa12.27□□□□□ -0.45
CIITA-212ENST00000618207 TMEM199Q8N511 208 aa12.27□□□□□ -0.45
CIITA-212ENST00000618207 OR2AP1Q8NGE2 309 aa12.27□□□□□ -0.45
CIITA-212ENST00000618207 KCNJ9Q92806 393 aa12.27□□□□□ -0.45
CIITA-212ENST00000618207 ACDQ96AP0 544 aa12.27□□□□□ -0.45
CIITA-212ENST00000618207 VPS33AQ96AX1 596 aa12.27□□□□□ -0.45
CIITA-212ENST00000618207 NSUN3Q9H649 340 aaKnown RBP12.27□□□□□ -0.45
CIITA-212ENST00000618207 ATP13A3Q9H7F0 1226 aa12.27□□□□□ -0.45
CIITA-212ENST00000618207 NOL11Q9H8H0 719 aaKnown RBP12.27□□□□□ -0.45
CIITA-212ENST00000618207 LATS2Q9NRM7 1088 aa12.27□□□□□ -0.45
CIITA-212ENST00000618207 PRPF19Q9UMS4 504 aaKnown RBP12.27□□□□□ -0.45
CIITA-212ENST00000618207 VPS9D1Q9Y2B5 631 aa12.27□□□□□ -0.45
CIITA-212ENST00000618207 LRCH1Q9Y2L9 728 aa12.27□□□□□ -0.45
CIITA-212ENST00000618207 SZT2Q5T011 3432 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 GLYATL1P3A0A0U1RQE8 302 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 KRT87PA6NCN2 255 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 BAIAP3O94812 1187 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 GLUD1P00367 558 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 ESR1P03372 595 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 ZNF7P17097 686 aaPredicted RBP12.26□□□□□ -0.45
CIITA-212ENST00000618207 SERPINA4P29622 427 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 HSPA7P48741 367 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 INHBCP55103 352 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 FUT11Q495W5 492 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 AAGABQ6PD74 315 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 ZNF783Q6ZMS7 281 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 DPY19L3Q6ZPD9 716 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 CHST14Q8NCH0 376 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 GPR26Q8NDV2 337 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 JADE3Q92613 823 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 TEX37Q96LM6 180 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 KLHL32Q96NJ5 620 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 DNMT3BQ9UBC3 853 aaKnown RBP12.26□□□□□ -0.45
CIITA-212ENST00000618207 PCTPQ9UKL6 214 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 NUP214P35658 2090 aaPredicted RBP12.26□□□□□ -0.45
CIITA-212ENST00000618207 PRORSD1PA6NEY8 169 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 CAPN8A6NHC0 703 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 ITGALP20701 1170 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 ADSLP30566 484 aaPredicted RBP12.26□□□□□ -0.45
CIITA-212ENST00000618207 CTNNB1P35222 781 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 GCKP35557 465 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 SLC7A2P52569 658 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 KANK2Q63ZY3 851 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 LRRC66Q68CR7 880 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 RBM23Q86U06 439 aaKnown RBP12.26□□□□□ -0.45
CIITA-212ENST00000618207 IFNEQ86WN2 208 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 CYB5D2Q8WUJ1 264 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 SEMA6AQ9H2E6 1030 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 PIF1Q9H611 641 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 CROCCQ5TZA2 2017 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 KIAA1671Q9BY89 1806 aa12.26□□□□□ -0.45
CIITA-212ENST00000618207 GFRA2O00451 464 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 FFAR3O14843 346 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 GPR42O15529 346 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 RPS17P08708 135 aaKnown RBP12.25□□□□□ -0.45
CIITA-212ENST00000618207 CAPN3P20807 821 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 HTR6P50406 440 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 LRP8Q14114 963 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 HERC3Q15034 1050 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 SGO1Q5FBB7 561 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 FIBINQ8TAL6 211 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 EGFL7Q9UHF1 273 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 WNT6Q9Y6F9 365 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 REV3LO60673 3130 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 H7C0S8 307 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 LBPP18428 481 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 GPX3P22352 226 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 SLC7A9P82251 487 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 BLMHQ13867 455 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 PHKG1Q16816 387 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 AAK1Q2M2I8 961 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 LETMD1Q6P1Q0 360 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 LILRA6Q6PI73 481 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 CCDC149Q6ZUS6 474 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 GALNT4Q8N4A0 578 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 OR2T11Q8NH01 316 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 SLC25A23Q9BV35 468 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 P2RY12Q9H244 342 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 MBD1Q9UIS9 605 aaPredicted RBP12.25□□□□□ -0.45
CIITA-212ENST00000618207 CROTQ9UKG9 612 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 DHRS7Q9Y394 339 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 PTPRSQ13332 1948 aa12.25□□□□□ -0.45
CIITA-212ENST00000618207 E2F3O00716 465 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 SLC22A2O15244 555 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 LATS1O95835 1130 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 CAPN1P07384 714 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 FGF4P08620 206 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 HSPA1AP0DMV8 641 aaKnown RBP12.24□□□□□ -0.45
CIITA-212ENST00000618207 HSPA1BP0DMV9 641 aaKnown RBP12.24□□□□□ -0.45
CIITA-212ENST00000618207 RFC2P35250 354 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 IRS1P35568 1242 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 CLCN4P51793 760 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 ERVPABLB-1P60509 514 aa12.24□□□□□ -0.45
CIITA-212ENST00000618207 SNRPD1P62314 119 aaKnown RBP12.24□□□□□ -0.45
CIITA-212ENST00000618207 MAPRE2Q15555 327 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms