RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 SMPD4Q9NXE4 827 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 TNFRSF10DQ9UBN6 386 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 TRPS1Q9UHF7 1281 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 FBXW11Q9UKB1 542 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 ZNF175Q9Y473 711 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 PCDHB7Q9Y5E2 793 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 USP3Q9Y6I4 520 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 C16orf96A6NNT2 1141 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 TM9SF1O15321 606 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 CHADO15335 359 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 ADAM11O75078 769 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 SNAP29O95721 258 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 PRKCGP05129 697 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 ITGA2P17301 1181 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 PSMC3P17980 439 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 CAPZA2P47755 286 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 GLRBP48167 497 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 SERPINH1P50454 418 aaKnown RBP5.52□□□□□ -1.53
CPNE4-214ENST00000617767 ERVK-21P61565 698 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 CDC20Q12834 499 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 ZNF460Q14592 562 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 ZBED5Q49AG3 693 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 TOR2AQ5JU69 321 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 OGFRL1Q5TC84 451 aaPredicted RBP5.52□□□□□ -1.53
CPNE4-214ENST00000617767 RAP1GAP2Q684P5 730 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.52□□□□□ -1.53
CPNE4-214ENST00000617767 BHLHA9Q7RTU4 235 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 STRA8Q7Z7C7 330 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 SCD5Q86SK9 330 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 EFCAB3Q8N7B9 438 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 ST13P5Q8NFI4 369 aaPredicted RBP5.52□□□□□ -1.53
CPNE4-214ENST00000617767 OR7D4Q8NG98 312 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 URGCPQ8TCY9 931 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 SIGLEC10Q96LC7 697 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 FCRL3Q96P31 734 aaPredicted RBP5.52□□□□□ -1.53
CPNE4-214ENST00000617767 PPP1R2P1Q96PQ5 205 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 ACBD6Q9BR61 282 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 APOL5Q9BWW9 433 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 CXorf21Q9HAI6 301 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 POLR3BQ9NW08 1133 aaPredicted RBP5.52□□□□□ -1.53
CPNE4-214ENST00000617767 MALT1Q9UDY8 824 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 SEPT3Q9UH03 358 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 PLA2G4CQ9UP65 541 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 CDY1Q9Y6F8 540 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 LAMA1P25391 3075 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 TRANK1O15050 2925 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 ATG2BQ96BY7 2078 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 OR6C65A6NJZ3 312 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 EVPLLA8MZ36 301 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 LYPLA1O75608 230 aaPredicted RBP5.52□□□□□ -1.53
CPNE4-214ENST00000617767 ALDH1A1P00352 501 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 SFTPCP11686 197 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 CASP3P42574 277 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 TBX4P57082 545 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 RAD51Q06609 339 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 SCRN3Q0VDG4 424 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 TAF10Q12962 218 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 C6orf10Q5SRN2 563 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 LHX8Q68G74 356 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 HMBOX1Q6NT76 420 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 ADGRD1Q6QNK2 874 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 LDB1Q86U70 411 aaPredicted RBP5.52□□□□□ -1.53
CPNE4-214ENST00000617767 GALNT11Q8NCW6 608 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 ACVR1CQ8NER5 493 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 ACDQ96AP0 544 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 PHF21AQ96BD5 680 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 DMRTB1Q96MA1 342 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 SLC2A13Q96QE2 648 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 UPF3AQ9H1J1 476 aaKnown RBP5.52□□□□□ -1.53
CPNE4-214ENST00000617767 DNAJC28Q9NX36 388 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 LGALS13Q9UHV8 139 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 EVLQ9UI08 416 aaPredicted RBP5.52□□□□□ -1.53
CPNE4-214ENST00000617767 RNF11Q9Y3C5 154 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 GREB1Q4ZG55 1949 aa5.52□□□□□ -1.53
CPNE4-214ENST00000617767 DCLK1O15075 740 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 KPNA5O15131 536 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 H6PDO95479 791 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 ABHD2P08910 425 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 MX2P20592 715 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 MAP4P27816 1152 aaKnown RBP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 FMO4P31512 558 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 CD68P34810 354 aaPredicted RBP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 GRIA3P42263 894 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 MAGEA11P43364 429 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 MAPKAPK2P49137 400 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 COPAP53621 1224 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 RPL10AP62906 217 aaKnown RBP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 VAC14Q08AM6 782 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 FUT11Q495W5 492 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 KIAA1841Q6NSI8 718 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 PLEKHG7Q6ZR37 379 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 SLC26A11Q86WA9 606 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 ATPAF2Q8N5M1 289 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 SIMC1Q8NDZ2 872 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 OR2T3Q8NH03 318 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 GRPEL2Q8TAA5 225 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 TEX47Q8TBZ9 253 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 ASB12Q8WXK4 309 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 FBXO32Q969P5 355 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 MYEOVQ96EZ4 313 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms