RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 TCTN2Q96GX1 697 aa17.43■□□□□ 0.38
TRAPPC3-209ENST00000616395 RETREG1Q9H6L5 497 aa17.43■□□□□ 0.38
TRAPPC3-209ENST00000616395 DONSONQ9NYP3 566 aa17.43■□□□□ 0.38
TRAPPC3-209ENST00000616395 CROTQ9UKG9 612 aa17.43■□□□□ 0.38
TRAPPC3-209ENST00000616395 SUFUQ9UMX1 484 aa17.43■□□□□ 0.38
TRAPPC3-209ENST00000616395 C2CD3Q4AC94 2353 aa17.42■□□□□ 0.38
TRAPPC3-209ENST00000616395 CDC14CA4D256 554 aa17.42■□□□□ 0.38
TRAPPC3-209ENST00000616395 APOC4-APOC2K7ER74 178 aa17.42■□□□□ 0.38
TRAPPC3-209ENST00000616395 POLR1CO15160 346 aaPredicted RBP17.42■□□□□ 0.38
TRAPPC3-209ENST00000616395 DAPK3O43293 454 aa17.42■□□□□ 0.38
TRAPPC3-209ENST00000616395 CST8O60676 142 aa17.42■□□□□ 0.38
TRAPPC3-209ENST00000616395 SORBS2O94875 1100 aaKnown RBP17.42■□□□□ 0.38
TRAPPC3-209ENST00000616395 LDLRP01130 860 aa17.42■□□□□ 0.38
TRAPPC3-209ENST00000616395 APOC2P02655 101 aa17.42■□□□□ 0.38
TRAPPC3-209ENST00000616395 ELFN1P0C7U0 828 aa17.42■□□□□ 0.38
TRAPPC3-209ENST00000616395 IL1R2P27930 398 aa17.42■□□□□ 0.38
TRAPPC3-209ENST00000616395 CTBSQ01459 385 aa17.42■□□□□ 0.38
TRAPPC3-209ENST00000616395 SNX1Q13596 522 aa17.42■□□□□ 0.38
TRAPPC3-209ENST00000616395 MAP7Q14244 749 aa17.42■□□□□ 0.38
TRAPPC3-209ENST00000616395 DPYSL2Q16555 572 aa17.42■□□□□ 0.38
TRAPPC3-209ENST00000616395 TAZQ16635 292 aa17.42■□□□□ 0.38
TRAPPC3-209ENST00000616395 PPP6R3Q5H9R7 873 aaPredicted RBP17.42■□□□□ 0.38
TRAPPC3-209ENST00000616395 TXNRD3NBQ6F5E7 133 aa17.42■□□□□ 0.38
TRAPPC3-209ENST00000616395 RTL3Q8N8U3 475 aaKnown RBP17.42■□□□□ 0.38
TRAPPC3-209ENST00000616395 OR10G6Q8NH81 332 aa17.42■□□□□ 0.38
TRAPPC3-209ENST00000616395 C1orf54Q8WWF1 131 aa17.42■□□□□ 0.38
TRAPPC3-209ENST00000616395 ZNF641Q96N77 438 aaPredicted RBP17.42■□□□□ 0.38
TRAPPC3-209ENST00000616395 RNF157Q96PX1 679 aa17.42■□□□□ 0.38
TRAPPC3-209ENST00000616395 ASIC3Q9UHC3 531 aa17.42■□□□□ 0.38
TRAPPC3-209ENST00000616395 ERRFI1Q9UJM3 462 aaPredicted RBP17.42■□□□□ 0.38
TRAPPC3-209ENST00000616395 ZNF106Q9H2Y7 1883 aaKnown RBP17.41■□□□□ 0.38
TRAPPC3-209ENST00000616395 KATNA1O75449 491 aa17.41■□□□□ 0.38
TRAPPC3-209ENST00000616395 ZNF28P17035 718 aa17.41■□□□□ 0.38
TRAPPC3-209ENST00000616395 INPP5JQ15735 1006 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC3-209ENST00000616395 SLC38A3Q99624 504 aa17.41■□□□□ 0.38
TRAPPC3-209ENST00000616395 TRIM55Q9BYV6 548 aa17.41■□□□□ 0.38
TRAPPC3-209ENST00000616395 FRMD8Q9BZ67 464 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC3-209ENST00000616395 PCDH18Q9HCL0 1135 aa17.41■□□□□ 0.38
TRAPPC3-209ENST00000616395 RP1L1Q8IWN7 2480 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 TRBV23OR9-2A0A075B6M9 112 aa17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 A8MX80 341 aa17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 EEF2KO00418 725 aaKnown RBP17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 LIASO43766 372 aa17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 HTR7P34969 479 aa17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 ADCY8P40145 1251 aa17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 ACTR1BP42025 376 aa17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 NR2C2P49116 596 aa17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 ACTR1AP61163 376 aa17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 DYNLT1P63172 113 aa17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 DPYSL3Q14195 570 aa17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 GRM3Q14832 879 aa17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 SIX1Q15475 284 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 AFMIDQ63HM1 303 aa17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 WDR74Q6RFH5 385 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 APLFQ8IW19 511 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 GOLGA6L1Q8N7Z2 621 aa17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 PDCD6IPQ8WUM4 868 aaKnown RBP17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 CELF6Q96J87 481 aaKnown RBP17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 RUFY1Q96T51 708 aa17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 TEX101Q9BY14 249 aa17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 ULBP3Q9BZM4 244 aa17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 PHPT1Q9NRX4 125 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 PLEKHM1Q9Y4G2 1056 aa17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 SHANK1Q9Y566 2161 aa17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 ESPL1Q14674 2120 aa17.4■□□□□ 0.38
TRAPPC3-209ENST00000616395 TCRBV7S2A1N4TA0A589 114 aa17.39■□□□□ 0.37
TRAPPC3-209ENST00000616395 C3orf70A6NLC5 250 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC3-209ENST00000616395 INPP4BO15327 924 aa17.39■□□□□ 0.37
TRAPPC3-209ENST00000616395 STIP1P31948 543 aaKnown RBP17.39■□□□□ 0.37
TRAPPC3-209ENST00000616395 POLD2P49005 469 aa17.39■□□□□ 0.37
TRAPPC3-209ENST00000616395 PGDP52209 483 aa17.39■□□□□ 0.37
TRAPPC3-209ENST00000616395 PEX6Q13608 980 aa17.39■□□□□ 0.37
TRAPPC3-209ENST00000616395 PTK6Q13882 451 aa17.39■□□□□ 0.37
TRAPPC3-209ENST00000616395 ACOX1Q15067 660 aa17.39■□□□□ 0.37
TRAPPC3-209ENST00000616395 LLGL1Q15334 1064 aa17.39■□□□□ 0.37
TRAPPC3-209ENST00000616395 ANKRD20A8PQ5CZ79 823 aa17.39■□□□□ 0.37
TRAPPC3-209ENST00000616395 DUPD1Q68J44 220 aa17.39■□□□□ 0.37
TRAPPC3-209ENST00000616395 C6orf15Q6UXA7 325 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC3-209ENST00000616395 C4orf22Q6V702 233 aa17.39■□□□□ 0.37
TRAPPC3-209ENST00000616395 PCGF5Q86SE9 256 aa17.39■□□□□ 0.37
TRAPPC3-209ENST00000616395 NPWQ8N729 165 aa17.39■□□□□ 0.37
TRAPPC3-209ENST00000616395 FAM71BQ8TC56 605 aa17.39■□□□□ 0.37
TRAPPC3-209ENST00000616395 NCSTNQ92542 709 aa17.39■□□□□ 0.37
TRAPPC3-209ENST00000616395 CAVIN3Q969G5 261 aa17.39■□□□□ 0.37
TRAPPC3-209ENST00000616395 SNF8Q96H20 258 aa17.39■□□□□ 0.37
TRAPPC3-209ENST00000616395 TWSG1Q9GZX9 223 aa17.39■□□□□ 0.37
TRAPPC3-209ENST00000616395 VIPAS39Q9H9C1 493 aa17.39■□□□□ 0.37
TRAPPC3-209ENST00000616395 KLHL3Q9UH77 587 aa17.39■□□□□ 0.37
TRAPPC3-209ENST00000616395 NFU1Q9UMS0 254 aa17.39■□□□□ 0.37
TRAPPC3-209ENST00000616395 TNRC6AQ8NDV7 1962 aaKnown RBP17.38■□□□□ 0.37
TRAPPC3-209ENST00000616395 PIPSLA2A3N6 862 aa17.38■□□□□ 0.37
TRAPPC3-209ENST00000616395 RASA4BC9J798 803 aa17.38■□□□□ 0.37
TRAPPC3-209ENST00000616395 RASA4O43374 803 aa17.38■□□□□ 0.37
TRAPPC3-209ENST00000616395 PTGIRP43119 386 aa17.38■□□□□ 0.37
TRAPPC3-209ENST00000616395 FASLGP48023 281 aa17.38■□□□□ 0.37
TRAPPC3-209ENST00000616395 EIF3EP60228 445 aaKnown RBP17.38■□□□□ 0.37
TRAPPC3-209ENST00000616395 SEMA5AQ13591 1074 aa17.38■□□□□ 0.37
TRAPPC3-209ENST00000616395 BEND6Q5SZJ8 279 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC3-209ENST00000616395 RFX8Q6ZV50 586 aa17.38■□□□□ 0.37
TRAPPC3-209ENST00000616395 DPPA4Q7L190 304 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms