RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 TIPARPQ7Z3E1 657 aaKnown RBP18.68■□□□□ 0.58
CDX1-202ENST00000616154 TRAM1L1Q8N609 369 aa18.68■□□□□ 0.58
CDX1-202ENST00000616154 GPR26Q8NDV2 337 aa18.68■□□□□ 0.58
CDX1-202ENST00000616154 KIAA1143Q96AT1 154 aaPredicted RBP18.68■□□□□ 0.58
CDX1-202ENST00000616154 PLEKHG4BQ96PX9 1271 aa18.68■□□□□ 0.58
CDX1-202ENST00000616154 EFHD1Q9BUP0 239 aa18.68■□□□□ 0.58
CDX1-202ENST00000616154 TBC1D10AQ9BXI6 508 aa18.68■□□□□ 0.58
CDX1-202ENST00000616154 OR2AG1Q9H205 316 aa18.68■□□□□ 0.58
CDX1-202ENST00000616154 APMAPQ9HDC9 416 aa18.68■□□□□ 0.58
CDX1-202ENST00000616154 PRDM8Q9NQV8 689 aa18.68■□□□□ 0.58
CDX1-202ENST00000616154 RAD18Q9NS91 495 aa18.68■□□□□ 0.58
CDX1-202ENST00000616154 KLC4Q9NSK0 619 aa18.68■□□□□ 0.58
CDX1-202ENST00000616154 FLNCQ14315 2725 aa18.67■□□□□ 0.58
CDX1-202ENST00000616154 CHUKO15111 745 aa18.67■□□□□ 0.58
CDX1-202ENST00000616154 STK17BO94768 372 aa18.67■□□□□ 0.58
CDX1-202ENST00000616154 SLC25A14O95258 325 aaPredicted RBP18.67■□□□□ 0.58
CDX1-202ENST00000616154 NDST3O95803 873 aa18.67■□□□□ 0.58
CDX1-202ENST00000616154 EPOP01588 193 aa18.67■□□□□ 0.58
CDX1-202ENST00000616154 ABHD18Q0P651 414 aa18.67■□□□□ 0.58
CDX1-202ENST00000616154 ZNF648Q5T619 568 aaPredicted RBP18.67■□□□□ 0.58
CDX1-202ENST00000616154 ALS2CLQ60I27 953 aa18.67■□□□□ 0.58
CDX1-202ENST00000616154 TMC3Q7Z5M5 1100 aa18.67■□□□□ 0.58
CDX1-202ENST00000616154 ADGRG6Q86SQ4 1221 aa18.67■□□□□ 0.58
CDX1-202ENST00000616154 PLXDC1Q8IUK5 500 aa18.67■□□□□ 0.58
CDX1-202ENST00000616154 SPATA22Q8NHS9 363 aa18.67■□□□□ 0.58
CDX1-202ENST00000616154 GLYATL1Q969I3 302 aa18.67■□□□□ 0.58
CDX1-202ENST00000616154 FCRL5Q96RD9 977 aa18.67■□□□□ 0.58
CDX1-202ENST00000616154 SRPK1Q96SB4 655 aaKnown RBP18.67■□□□□ 0.58
CDX1-202ENST00000616154 TRIT1Q9H3H1 467 aaKnown RBP18.67■□□□□ 0.58
CDX1-202ENST00000616154 ARFGAP3Q9NP61 516 aa18.67■□□□□ 0.58
CDX1-202ENST00000616154 TRMT1Q9NXH9 659 aaKnown RBP18.67■□□□□ 0.58
CDX1-202ENST00000616154 SIDT1Q9NXL6 827 aaKnown RBP18.67■□□□□ 0.58
CDX1-202ENST00000616154 KLHL3Q9UH77 587 aa18.67■□□□□ 0.58
CDX1-202ENST00000616154 LOC101059948A0A1B0GTJ6 334 aa18.66■□□□□ 0.58
CDX1-202ENST00000616154 LOC285095A0A1B0GVY8 99 aa18.66■□□□□ 0.58
CDX1-202ENST00000616154 POLR1CO15160 346 aaPredicted RBP18.66■□□□□ 0.58
CDX1-202ENST00000616154 NKX2-8O15522 239 aa18.66■□□□□ 0.58
CDX1-202ENST00000616154 DLGAP3O95886 979 aa18.66■□□□□ 0.58
CDX1-202ENST00000616154 MT-CYBP00156 380 aaPredicted RBP18.66■□□□□ 0.58
CDX1-202ENST00000616154 C9P02748 559 aa18.66■□□□□ 0.58
CDX1-202ENST00000616154 XRCC1P18887 633 aaPredicted RBP18.66■□□□□ 0.58
CDX1-202ENST00000616154 LLGL1Q15334 1064 aa18.66■□□□□ 0.58
CDX1-202ENST00000616154 KDELC1Q6UW63 502 aa18.66■□□□□ 0.58
CDX1-202ENST00000616154 B4GALNT4Q76KP1 1039 aa18.66■□□□□ 0.58
CDX1-202ENST00000616154 CCDC50Q8IVM0 306 aa18.66■□□□□ 0.58
CDX1-202ENST00000616154 ALG3Q92685 438 aa18.66■□□□□ 0.58
CDX1-202ENST00000616154 OSBPL8Q9BZF1 889 aa18.66■□□□□ 0.58
CDX1-202ENST00000616154 OSGEPL1Q9H4B0 414 aa18.66■□□□□ 0.58
CDX1-202ENST00000616154 LZTFL1Q9NQ48 299 aa18.66■□□□□ 0.58
CDX1-202ENST00000616154 OGFRQ9NZT2 677 aa18.66■□□□□ 0.58
CDX1-202ENST00000616154 FAM153AQ9UHL3 310 aa18.66■□□□□ 0.58
CDX1-202ENST00000616154 TRHDEQ9UKU6 1024 aa18.66■□□□□ 0.58
CDX1-202ENST00000616154 SHOC2Q9UQ13 582 aa18.66■□□□□ 0.58
CDX1-202ENST00000616154 ZNF711Q9Y462 761 aa18.66■□□□□ 0.58
CDX1-202ENST00000616154 PRR19A6NJB7 356 aa18.65■□□□□ 0.58
CDX1-202ENST00000616154 PIRTP0C851 137 aa18.65■□□□□ 0.58
CDX1-202ENST00000616154 GFERP55789 205 aa18.65■□□□□ 0.58
CDX1-202ENST00000616154 RWDD2BP57060 319 aa18.65■□□□□ 0.58
CDX1-202ENST00000616154 CDC20Q12834 499 aa18.65■□□□□ 0.58
CDX1-202ENST00000616154 MAP7Q14244 749 aa18.65■□□□□ 0.58
CDX1-202ENST00000616154 FAM182AQ5T1J6 154 aa18.65■□□□□ 0.58
CDX1-202ENST00000616154 CRTC3Q6UUV7 619 aa18.65■□□□□ 0.58
CDX1-202ENST00000616154 TMEM26Q6ZUK4 368 aa18.65■□□□□ 0.58
CDX1-202ENST00000616154 LRRTM4Q86VH4 590 aa18.65■□□□□ 0.58
CDX1-202ENST00000616154 ZC3H18Q86VM9 953 aaKnown RBP18.65■□□□□ 0.58
CDX1-202ENST00000616154 ZNF567Q8N184 647 aa18.65■□□□□ 0.58
CDX1-202ENST00000616154 C17orf53Q8N3J3 647 aaPredicted RBP18.65■□□□□ 0.58
CDX1-202ENST00000616154 C9orf72Q96LT7 481 aa18.65■□□□□ 0.58
CDX1-202ENST00000616154 TIMM29Q9BSF4 260 aa18.65■□□□□ 0.58
CDX1-202ENST00000616154 SCHIP1Q9P0W5 487 aaPredicted RBP18.65■□□□□ 0.58
CDX1-202ENST00000616154 SLC23A2Q9UGH3 650 aa18.65■□□□□ 0.58
CDX1-202ENST00000616154 GUCA1BQ9UMX6 200 aa18.65■□□□□ 0.58
CDX1-202ENST00000616154 CAPN6Q9Y6Q1 641 aa18.65■□□□□ 0.58
CDX1-202ENST00000616154 MACROD2A1Z1Q3 448 aa18.64■□□□□ 0.57
CDX1-202ENST00000616154 KMOO15229 486 aa18.64■□□□□ 0.57
CDX1-202ENST00000616154 VIPP01282 170 aa18.64■□□□□ 0.57
CDX1-202ENST00000616154 ZNF7P17097 686 aaPredicted RBP18.64■□□□□ 0.57
CDX1-202ENST00000616154 NFKB1P19838 968 aa18.64■□□□□ 0.57
CDX1-202ENST00000616154 TLE1Q04724 770 aa18.64■□□□□ 0.57
CDX1-202ENST00000616154 INSCQ1MX18 579 aa18.64■□□□□ 0.57
CDX1-202ENST00000616154 PLA2G4EQ3MJ16 856 aa18.64■□□□□ 0.57
CDX1-202ENST00000616154 CRTC2Q53ET0 693 aaPredicted RBP18.64■□□□□ 0.57
CDX1-202ENST00000616154 KDELC2Q7Z4H8 507 aa18.64■□□□□ 0.57
CDX1-202ENST00000616154 UNC5BQ8IZJ1 945 aa18.64■□□□□ 0.57
CDX1-202ENST00000616154 OXNAD1Q96HP4 312 aaPredicted RBP18.64■□□□□ 0.57
CDX1-202ENST00000616154 HEMGNQ9BXL5 484 aa18.64■□□□□ 0.57
CDX1-202ENST00000616154 GPR63Q9BZJ6 419 aa18.64■□□□□ 0.57
CDX1-202ENST00000616154 ZNF624Q9P2J8 865 aaPredicted RBP18.64■□□□□ 0.57
CDX1-202ENST00000616154 NBASA2RRP1 2371 aa18.64■□□□□ 0.57
CDX1-202ENST00000616154 MIF4GDA9UHW6 222 aaKnown RBP18.63■□□□□ 0.57
CDX1-202ENST00000616154 TOX3O15405 576 aaPredicted RBP18.63■□□□□ 0.57
CDX1-202ENST00000616154 VEGFDO43915 354 aa18.63■□□□□ 0.57
CDX1-202ENST00000616154 UBXN7O94888 489 aa18.63■□□□□ 0.57
CDX1-202ENST00000616154 SLC4A1P02730 911 aa18.63■□□□□ 0.57
CDX1-202ENST00000616154 PRKAR1AP10644 381 aa18.63■□□□□ 0.57
CDX1-202ENST00000616154 BPIP17213 487 aa18.63■□□□□ 0.57
CDX1-202ENST00000616154 SLC19A1P41440 591 aa18.63■□□□□ 0.57
CDX1-202ENST00000616154 STAT5AP42229 794 aa18.63■□□□□ 0.57
CDX1-202ENST00000616154 WNT3AP56704 352 aa18.63■□□□□ 0.57
CDX1-202ENST00000616154 MC1RQ01726 317 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms