RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 MAGEE2Q8TD90 523 aaPredicted RBP21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 CLEC4CQ8WTT0 213 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 TRMOQ9BU70 441 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 ATP13A3Q9H7F0 1226 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 ANAPC2Q9UJX6 822 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 ST14Q9Y5Y6 855 aa21.73■■□□□ 1.07
POLR2J3-220ENST00000613744 SNAP29O95721 258 aa21.72■■□□□ 1.07
POLR2J3-220ENST00000613744 GPX3P22352 226 aa21.72■■□□□ 1.07
POLR2J3-220ENST00000613744 CRHBPP24387 322 aa21.72■■□□□ 1.07
POLR2J3-220ENST00000613744 YAP1P46937 504 aaKnown RBP21.72■■□□□ 1.07
POLR2J3-220ENST00000613744 NRIP1P48552 1158 aa21.72■■□□□ 1.07
POLR2J3-220ENST00000613744 SERPINB10P48595 397 aa21.72■■□□□ 1.07
POLR2J3-220ENST00000613744 TKTL1P51854 596 aa21.72■■□□□ 1.07
POLR2J3-220ENST00000613744 ADIGQ0VDE8 80 aa21.72■■□□□ 1.07
POLR2J3-220ENST00000613744 SLC16A12Q6ZSM3 486 aa21.72■■□□□ 1.07
POLR2J3-220ENST00000613744 LARP4Q71RC2 724 aaKnown RBP eCLIP21.72■■□□□ 1.07
POLR2J3-220ENST00000613744 CNTN4Q8IWV2 1026 aa21.72■■□□□ 1.07
POLR2J3-220ENST00000613744 GPR65Q8IYL9 337 aa21.72■■□□□ 1.07
POLR2J3-220ENST00000613744 SPARTQ8N0X7 666 aa21.72■■□□□ 1.07
POLR2J3-220ENST00000613744 MUL1Q969V5 352 aa21.72■■□□□ 1.07
POLR2J3-220ENST00000613744 MRPL38Q96DV4 380 aaKnown RBP21.72■■□□□ 1.07
POLR2J3-220ENST00000613744 BDH2Q9BUT1 245 aa21.72■■□□□ 1.07
POLR2J3-220ENST00000613744 FUNDC2Q9BWH2 189 aa21.72■■□□□ 1.07
POLR2J3-220ENST00000613744 NDEL1Q9GZM8 345 aa21.72■■□□□ 1.07
POLR2J3-220ENST00000613744 OSBPL2Q9H1P3 480 aa21.72■■□□□ 1.07
POLR2J3-220ENST00000613744 IGFLR1Q9H665 355 aa21.72■■□□□ 1.07
POLR2J3-220ENST00000613744 AFF4Q9UHB7 1163 aaKnown RBP21.72■■□□□ 1.07
POLR2J3-220ENST00000613744 MYO18AQ92614 2054 aaKnown RBP21.72■■□□□ 1.07
POLR2J3-220ENST00000613744 PLXNA3P51805 1871 aa21.72■■□□□ 1.07
POLR2J3-220ENST00000613744 NUAK1O60285 661 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 STMN1P16949 149 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 ITIH1P19827 911 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 CLCN4P51793 760 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 AQP6Q13520 282 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 AASDHQ4L235 1098 aaPredicted RBP21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 C6orf183Q5T699 404 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 ZNF697Q5TEC3 545 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 SLX4IPQ5VYV7 408 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 Q7L0L9 218 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 THAP5Q7Z6K1 395 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 MFSD4AQ8N468 514 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 NACA2Q9H009 215 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 ING2Q9H160 280 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 MFHAS1Q9Y4C4 1052 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 XIRP2A4UGR9 3374 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 TCRBV5S2A0A599 114 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 ISPDA4D126 451 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 M0QX08 132 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 PRRG1O14668 218 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 EPCAMP16422 314 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 MAPK10P53779 464 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 ILF2Q12905 390 aaKnown RBP21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 PRPSAP1Q14558 356 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 INAVAQ3KP66 663 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 GPRIN1Q7Z2K8 1008 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 CUZD1Q86UP6 607 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 ZBTB46Q86UZ6 589 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 RETREG3Q86VR2 466 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 FUNDC1Q8IVP5 155 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 NDRG1Q92597 394 aaKnown RBP21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 NXNL1Q96CM4 212 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 LMAN2LQ9H0V9 348 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 SCUBE2Q9NQ36 999 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 SEPT10Q9P0V9 454 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 MAP10Q9P2G4 905 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 KLHL8Q9P2G9 620 aaPredicted RBP21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 FZD10Q9ULW2 581 aa21.71■■□□□ 1.07
POLR2J3-220ENST00000613744 PTPRDP23468 1912 aa21.7■■□□□ 1.07
POLR2J3-220ENST00000613744 TPST1O60507 370 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 GLUD1P00367 558 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 IGFBP4P22692 258 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 OXTRP30559 389 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 SERPINB1P30740 379 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 TPTEP56180 551 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 EPS8Q12929 822 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 PLCL1Q15111 1095 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 CYP51A1Q16850 503 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 TPGS2Q68CL5 300 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 PDE12Q6L8Q7 609 aaKnown RBP21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 CHST15Q7LFX5 561 aaPredicted RBP21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 BTLAQ7Z6A9 289 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 ARL10Q8N8L6 244 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 GIPC2Q8TF65 315 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 TSPEARQ8WU66 669 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 CHAC2Q8WUX2 184 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 FUBP3Q96I24 572 aaKnown RBP eCLIP21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 TRIM54Q9BYV2 358 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 MAGED2Q9UNF1 606 aaPredicted RBP21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 CENPBD1B2RD01 187 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 MTSS1O43312 755 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 HPRP00739 348 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 HAPLN1P10915 354 aaPredicted RBP21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 GRK3P35626 688 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 SF3B4Q15427 424 aaKnown RBP eCLIP21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 DGUOKQ16854 277 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 TIGD2Q4W5G0 525 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 PITRM1Q5JRX3 1037 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 LILRA6Q6PI73 481 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 FKBP9P1Q75LS8 142 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 SLC41A1Q8IVJ1 513 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms