RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 SORT1Q99523 831 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 COPS8Q99627 209 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 BOCQ9BWV1 1114 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 GATA5Q9BWX5 397 aaPredicted RBP8.82□□□□□ -1
CCDC47-207ENST00000612558 SPATA16Q9BXB7 569 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 HDAC8Q9BY41 377 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 DRC3Q9H069 523 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 KDM4CQ9H3R0 1056 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 ALG9Q9H6U8 611 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 KCNK13Q9HB14 408 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 TRPV5Q9NQA5 729 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 DYRK4Q9NR20 520 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 SMOXQ9NWM0 555 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 CACNA2D2Q9NY47 1150 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 KCNK4Q9NYG8 393 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 GALPQ9UBC7 116 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 DCTN4Q9UJW0 460 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 DHRS7Q9Y394 339 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 MTF2Q9Y483 593 aaPredicted RBP8.82□□□□□ -1
CCDC47-207ENST00000612558 STON1Q9Y6Q2 735 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 IGLV3-16A0A075B6K0 115 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 A0A0G2JND7 137 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 CDC14CA4D256 554 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 SLC35F4A4IF30 521 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 A8MT66 165 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 IQCF5A8MTL0 148 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 H3BQ06 376 aaPredicted RBP8.81□□□□□ -1
CCDC47-207ENST00000612558 K7EQS6 105 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 AREL1O15033 823 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 NPHS1O60500 1241 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 LYPLA1O75608 230 aaPredicted RBP8.81□□□□□ -1
CCDC47-207ENST00000612558 DCTN3O75935 186 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 HSPA4LO95757 839 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 TPBGLP0DKB5 382 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 ADRB3P13945 408 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 ETV3P41162 512 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 KIR2DL1P43626 348 aaPredicted RBP8.81□□□□□ -1
CCDC47-207ENST00000612558 KCNC1P48547 511 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 METAP1P53582 386 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 CCDC15Q0P6D6 951 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 RCN2Q14257 317 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 SETDB1Q15047 1291 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 CFAP157Q5JU67 520 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 HENMT1Q5T8I9 393 aaKnown RBP8.81□□□□□ -1
CCDC47-207ENST00000612558 ERN2Q76MJ5 926 aaKnown RBP8.81□□□□□ -1
CCDC47-207ENST00000612558 PIWIL4Q7Z3Z4 852 aaKnown RBP8.81□□□□□ -1
CCDC47-207ENST00000612558 MMAAQ8IVH4 418 aaKnown RBP8.81□□□□□ -1
CCDC47-207ENST00000612558 CHPFQ8IZ52 775 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 CLDN19Q8N6F1 224 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 ZNF513Q8N8E2 541 aaPredicted RBP8.81□□□□□ -1
CCDC47-207ENST00000612558 GBP7Q8N8V2 638 aaPredicted RBP8.81□□□□□ -1
CCDC47-207ENST00000612558 TXNDC5Q8NBS9 432 aaKnown RBP8.81□□□□□ -1
CCDC47-207ENST00000612558 GIMAP7Q8NHV1 300 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 SCAMP4Q969E2 229 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 RAB7BQ96AH8 199 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 PDLIM5Q96HC4 596 aaKnown RBP8.81□□□□□ -1
CCDC47-207ENST00000612558 SLC30A3Q99726 388 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 ZSCAN5AQ9BUG6 496 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 TMEM120AQ9BXJ8 343 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 LATS2Q9NRM7 1088 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 NCKIPSDQ9NZQ3 722 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 CD84Q9UIB8 345 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 DNAJC16Q9Y2G8 782 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 PRSS21Q9Y6M0 314 aa8.81□□□□□ -1
CCDC47-207ENST00000612558 ATG2BQ96BY7 2078 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 PLXNB3Q9ULL4 1909 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 ANTXRLA6NF34 631 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 SYCE1LA8MT33 242 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 SPECC1L-ADORA2AF8WAN1 911 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 WNT9AO14904 365 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 RNASEH1O60930 286 aaKnown RBP8.8□□□□□ -1
CCDC47-207ENST00000612558 SMIM24O75264 130 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 SLC25A14O95258 325 aaPredicted RBP8.8□□□□□ -1
CCDC47-207ENST00000612558 TRIM16O95361 564 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 TSPAN12O95859 305 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 KITP10721 976 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 IMPDH1P20839 514 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 ARRB2P32121 409 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 LIG3P49916 1009 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 NFKB2Q00653 900 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 PRKAA1Q13131 559 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 CAMK2GQ13555 558 aaPredicted RBP8.8□□□□□ -1
CCDC47-207ENST00000612558 ACOX1Q15067 660 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 OR4D1Q15615 310 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 CRY1Q16526 586 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 ZNF284Q2VY69 593 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 TMEM52BQ4KMG9 183 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 GPRC6AQ5T6X5 926 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 CYP2U1Q7Z449 544 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 RALGPS2Q86X27 583 aaPredicted RBP8.8□□□□□ -1
CCDC47-207ENST00000612558 VWA5B2Q8N398 1253 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 FITM2Q8N6M3 262 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 EEF1AKMT1Q8WVE0 214 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 CCDC97Q96F63 343 aaPredicted RBP8.8□□□□□ -1
CCDC47-207ENST00000612558 CNDP1Q96KN2 507 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 COQ10AQ96MF6 247 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 LRRC37BQ96QE4 947 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 PANX3Q96QZ0 392 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 ATOH8Q96SQ7 321 aa8.8□□□□□ -1
CCDC47-207ENST00000612558 ARHGAP9Q9BRR9 750 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms