RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 BBS2Q9BXC9 721 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 KLHL4Q9C0H6 718 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 SUV39H2Q9H5I1 410 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 CXXC1Q9P0U4 656 aaPredicted RBP13.45□□□□□ -0.26
NEK3-205ENST00000610828 SLC25A13Q9UJS0 675 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 PSMD13Q9UNM6 376 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 SLC4A7Q9Y6M7 1214 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 TRBV5-4A0A0C4DH59 114 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 ACOT8O14734 319 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 GRM6O15303 877 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 VPS4BO75351 444 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 OR4F21O95013 312 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 GUCA1CO95843 209 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 FGBP02675 491 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 PFKLP17858 780 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 RGS4P49798 205 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 CCNHP51946 323 aaPredicted RBP13.45□□□□□ -0.26
NEK3-205ENST00000610828 DIO3P55073 304 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 C18orf21Q32NC0 220 aaPredicted RBP13.45□□□□□ -0.26
NEK3-205ENST00000610828 ASTLQ6HA08 431 aaPredicted RBP13.45□□□□□ -0.26
NEK3-205ENST00000610828 IRGCQ6NXR0 463 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 TPRG1Q6ZUI0 275 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 SPATA24Q86W54 205 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 MYO1HQ8N1T3 1032 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 PQLC1Q8N2U9 271 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 CDYL2Q8N8U2 506 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 GPR26Q8NDV2 337 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 MICAL1Q8TDZ2 1067 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 ASB9Q96DX5 294 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 NUSAP1Q9BXS6 441 aaKnown RBP13.45□□□□□ -0.26
NEK3-205ENST00000610828 GEMIN8Q9NWZ8 242 aaKnown RBP13.45□□□□□ -0.26
NEK3-205ENST00000610828 SLCO3A1Q9UIG8 710 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 CROTQ9UKG9 612 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 SARDHQ9UL12 918 aa13.45□□□□□ -0.26
NEK3-205ENST00000610828 FFAR2O15552 330 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 S100BP04271 92 aaPredicted RBP13.44□□□□□ -0.26
NEK3-205ENST00000610828 UGT2B4P06133 528 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 IDO1P14902 403 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 CTNNB1P35222 781 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 GPR33Q49SQ1 333 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 VPS26BQ4G0F5 336 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 LRRC73Q5JTD7 316 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 LYPLAL1Q5VWZ2 237 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 DPY19L3Q6ZPD9 716 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 USP45Q70EL2 814 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 EFL1Q7Z2Z2 1120 aaKnown RBP13.44□□□□□ -0.26
NEK3-205ENST00000610828 MRPL43Q8N983 215 aaKnown RBP13.44□□□□□ -0.26
NEK3-205ENST00000610828 PCYOX1LQ8NBM8 494 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 VOPP1Q96AW1 172 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 ISG20Q96AZ6 181 aaKnown RBP13.44□□□□□ -0.26
NEK3-205ENST00000610828 SCRN2Q96FV2 425 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 LYSMD1Q96S90 227 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 C19orf43Q9BQ61 176 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 APOL5Q9BWW9 433 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 PCDHAC1Q9H158 963 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 ABCG8Q9H221 673 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 NOL11Q9H8H0 719 aaKnown RBP13.44□□□□□ -0.26
NEK3-205ENST00000610828 MRPL40Q9NQ50 206 aaKnown RBP13.44□□□□□ -0.26
NEK3-205ENST00000610828 EPS15L1Q9UBC2 864 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 IRAK3Q9Y616 596 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 HELZP42694 1942 aaKnown RBP13.44□□□□□ -0.26
NEK3-205ENST00000610828 PRORSD1PA6NEY8 169 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 LIN7AO14910 233 aaPredicted RBP13.44□□□□□ -0.26
NEK3-205ENST00000610828 ANGPT2O15123 496 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 RAD51BO15315 384 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 DGKAP23743 735 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 MRPS35P82673 323 aaKnown RBP13.44□□□□□ -0.26
NEK3-205ENST00000610828 TRIM25Q14258 630 aaKnown RBP13.44□□□□□ -0.26
NEK3-205ENST00000610828 GRAMD1BQ3KR37 738 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 SFT2D3Q587I9 215 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 ZFP1Q6P2D0 407 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 RETREG3Q86VR2 466 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 PDSS2Q86YH6 399 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 NXPE1Q8N323 547 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 CBARPQ8N350 705 aaPredicted RBP13.44□□□□□ -0.26
NEK3-205ENST00000610828 TUBGCP5Q96RT8 1024 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 ZNF382Q96SR6 550 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 HTATIP2Q9BUP3 242 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 IL1RL2Q9HB29 575 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 SDR39U1Q9NRG7 319 aaPredicted RBP13.44□□□□□ -0.26
NEK3-205ENST00000610828 TDP1Q9NUW8 608 aa13.44□□□□□ -0.26
NEK3-205ENST00000610828 C6orf203Q9P0P8 240 aaPredicted RBP13.44□□□□□ -0.26
NEK3-205ENST00000610828 BBIP1A8MTZ0 92 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 RHOP08100 348 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 TYRP14679 529 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 PTPN2P17706 415 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 CAPN3P20807 821 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 PSMD8P48556 350 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 ERVPABLB-1P60509 514 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 GSTA3Q16772 222 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 LETMD1Q6P1Q0 360 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 FBXO46Q6PJ61 603 aaPredicted RBP13.43□□□□□ -0.26
NEK3-205ENST00000610828 Q6ZVU0 165 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 ZBTB2Q8N680 514 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 MYLIPQ8WY64 445 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 DLG3Q92796 817 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 ATP6V1E2Q96A05 226 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 ROPN1LQ96C74 230 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 ECHDC3Q96DC8 303 aa13.43□□□□□ -0.26
NEK3-205ENST00000610828 SLC45A3Q96JT2 553 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms